Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1794 |
Symbol | |
ID | 6275728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2181989 |
End bp | 2182795 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642613858 |
Product | peptidase S24 and S26 domain protein |
Protein accession | YP_001878393 |
Protein GI | 187736281 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.854647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 0.00408927 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACACCGA CAAAAGGGGA TGTGAAACAC TGGTTGAAGG CCATTGGGAA AAACCGTGAC TGGCTTGCCA TGGAATGCGG TACGGAAAAA GGTACGGTGA ATAACTGGCT CTCCCCCTCC GGCCCCTTCC CCGCCAGCGC CATGTTGAAA ATCCAATCCC TGATGTCTCA ATACAAAACG GTTCGACCGG AAGACGAACC TGTCCAGACC AATCGCCTCG TGCTGGAAAT CACGGAAGAG CGCATGAGGA AATATGAACG GGCCGCCTCT GAAAAAGGCG TCCCCCTCCG CCAGTGGCTG ACGGATTTGG CAGACGAAGC GGCGGAGGAA CGCCAGCTGC GGCCAATGCA CTCTCCCCTG GTTCCCCTGG TCAGACAATT TCCGTCCCAT GCTGGACACG CCAGGCGTGA ATACAGTACG CAAATAATCG GCAACATCGC CGCAGGCTCT CTTGCGGAAA GCGACACCGT CCCGTCTACC ATTTACATGG AAAGGCCCCT GGGTAAAAAC GAATACGTGG TCCGCGTAGA AGGGAAATCC ATGGAACCCC TCATCCCGGA CGGCTCCCTG GTAATTATGC GGCGCCATAC CGCCCCGCCC ATCCCCAAAC CGGGAACCAT CGTGGAATAC AACGACGGAC GCGGCGTTAC GCTGAAAAAA CTGATTCGCA GGAAAAACGC GGAAACAGGA AAAACGGAAT ACGTGCTGCA GCCCATCAAC CCCGCATTCA AGGACATAAC CCCCATGGAC GGCGGCAGTA TCTCCGGAAT ATATATGGAA ACCCTTGTAA ACTACCGCAA AGGCTGA
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Protein sequence | MTPTKGDVKH WLKAIGKNRD WLAMECGTEK GTVNNWLSPS GPFPASAMLK IQSLMSQYKT VRPEDEPVQT NRLVLEITEE RMRKYERAAS EKGVPLRQWL TDLADEAAEE RQLRPMHSPL VPLVRQFPSH AGHARREYST QIIGNIAAGS LAESDTVPST IYMERPLGKN EYVVRVEGKS MEPLIPDGSL VIMRRHTAPP IPKPGTIVEY NDGRGVTLKK LIRRKNAETG KTEYVLQPIN PAFKDITPMD GGSISGIYME TLVNYRKG
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