| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1763 |
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| Symbol | |
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| ID | 6275357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2146414 |
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| End bp | 2147109 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642613826 |
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| Product | alanine racemase domain protein |
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| Protein accession | YP_001878362 |
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| Protein GI | 187736250 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
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| TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.510381 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATCC AACAAAATCT GGAACATATT CTCTCCCGCA TACGCGCAGC GGAACTCCGC
GCCGGACGTC CGGCGGGTTC CGTCCGCCTC GTCGCCGTCA GCAAAACTTT TCCCGCAGAG
GATGTGAAAG CGTGCCATGA TGCGGGCCAG CGCATTTTCG GTGAAAACAA GGTCCAGGAG
GGACTGGGAA AAATCCCCTC CCTTCCTCCG GATACGGAAT GGCATCTCAT TGGCCCCCTC
CAGCGCAACA AGGTGCGCAA GGCCCTGGAA TATTTCACGC TGATCCATGC CGTGGACTCC
CTGCGCCTGG CCCGGTTCAT GGATACCGTG GCTCAGGAAA CGGGAAAACG GCCCCGCATT
TTGCTGGAAG TGAACGTAGG CAATGAAGAC AGTAAGTTCG GATTCTTCCC GGAAACCCTG
GAAAAGGAAT GGCCGGAGCT GTCCTCCCTG AACCATCTTG AAATCGCCGG CCTTATGTGC
ATTCCCCCCC CGGTGGAAAA TCCGGAGGAG GCGCGGCCCT ATTTCCGCCG CCTCCGGGAG
CTGAAGGAAG TCCTGTCCGG CAGGGGAGGA GCCACGCTGA CGGAACTGTC CATGGGCATG
AGCCACGACT TTGAAACGGC AATAGAGGAA GGAGCCACGC TCGTCCGCGT AGGGACGGCT
ATTTTCGGCG GCCGCTCGTA CGCTCCCGCT TCGTGA
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| Protein sequence | MSIQQNLEHI LSRIRAAELR AGRPAGSVRL VAVSKTFPAE DVKACHDAGQ RIFGENKVQE
GLGKIPSLPP DTEWHLIGPL QRNKVRKALE YFTLIHAVDS LRLARFMDTV AQETGKRPRI
LLEVNVGNED SKFGFFPETL EKEWPELSSL NHLEIAGLMC IPPPVENPEE ARPYFRRLRE
LKEVLSGRGG ATLTELSMGM SHDFETAIEE GATLVRVGTA IFGGRSYAPA S
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