Gene Amuc_1694 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1694 
Symbol 
ID6275730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2059502 
End bp2060539 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content56% 
IMG OID642613753 
Productcytochrome d ubiquinol oxidase, subunit II 
Protein accessionYP_001878293 
Protein GI187736181 
COG category[C] Energy production and conversion 
COG ID[COG1294] Cytochrome bd-type quinol oxidase, subunit 2 
TIGRFAM ID[TIGR00203] cytochrome d oxidase, subunit II (cydB) 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.000179365 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTTGGACA ATCTCACTCT CGCAGACCTG CAAATCATCT GGTTCATCCT CGTCGGCGTG 
CTTTTCTCCG GATACGCCAT CCTGGACGGC TTTGACCTGG GCACCGGAGC TCTTCAGCTT
TTCATCAAGG GCGATGAAAA CAGAAGACTC ACACTAAATG CCGTGGGCCC TGTATGGGAC
GGAAACGAAG TCTGGCTCAT CACAGGCGGA GGAGCCCTCT TCGCTGCCTT TCCGTACGTA
TACGCCTCCG TCTTCTCCGG GTTTTACCTG GCCTTCATGC TCCTGCTGCT CACCCTTATC
TTCCGTGCCG TGTCCATTGA ATTCAGAAGC AAACAGCCCA TGAAATGGTG GCGCAGGGGA
TGGGACACCA CTTTCTCCAT CAGCAGCCTT CTGGCAGCTC TGCTCATCGG CGTAGCCATG
GGGAACGTCA CCAAAGGCAT TCCTCTGGAC GACCATGGCA ACTTCACCGG AACATTTCTC
AGCCTGCTGA ATCCTTATTC CATTCTTCTG GGACTGACGA CGGTCGCCCT GTTCTCCATG
CACGGGGGAA TCTACCTGCT GATGAAAACC CAGGGAAGCC TGCAGGAACA AATCAGAAAA
CTGCTCAGAC CCTGCGTCAT CATCTTCACT GTCCTGATCA TCCTGCACGG GGCGGCCACC
CTGCTGTACG TGCCGCACGT AGCGGCCGCC CTGGAACGCT CCCCCTGGAT TTACGGAATC
GCTGCCCTGG CAGTCATTTC CATCGCGTCC ATCTGGATAT TCATCCACAG GAACCGTCCG
GGCTGGGCCT TTGTCGCCTC CTGCTCCACC ATGGGCTGCA TGATGGCTCT CTTCGGGACA
GCGATGTTCC CCAACCTGCT CTACTCCATG CCCAATCCGG AACATTCCCT GACGCTCGCC
AACGGCTCAT CCACCCGGGA AAGCCTGGTC GTGATGACAT ACATAGCCAT TCTGGGCGTG
CCGCTCGTCC TGGCTTATTC CGCTGCCATT TACTGGGTCT TCCGCGGAAA AGTCCAGCTC
AACGAACACA GTTACTGA
 
Protein sequence
MLDNLTLADL QIIWFILVGV LFSGYAILDG FDLGTGALQL FIKGDENRRL TLNAVGPVWD 
GNEVWLITGG GALFAAFPYV YASVFSGFYL AFMLLLLTLI FRAVSIEFRS KQPMKWWRRG
WDTTFSISSL LAALLIGVAM GNVTKGIPLD DHGNFTGTFL SLLNPYSILL GLTTVALFSM
HGGIYLLMKT QGSLQEQIRK LLRPCVIIFT VLIILHGAAT LLYVPHVAAA LERSPWIYGI
AALAVISIAS IWIFIHRNRP GWAFVASCST MGCMMALFGT AMFPNLLYSM PNPEHSLTLA
NGSSTRESLV VMTYIAILGV PLVLAYSAAI YWVFRGKVQL NEHSY