| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1693 |
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| Symbol | |
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| ID | 6274617 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2056673 |
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| End bp | 2059438 |
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| Gene Length | 2766 bp |
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| Protein Length | 921 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613752 |
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| Product | 2-oxoglutarate dehydrogenase, E1 subunit |
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| Protein accession | YP_001878292 |
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| Protein GI | 187736180 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.00326952 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATGCCT CCATCTTCTC CAAACTCCCG CCGGAGGAAA TTACGGCGCT CCATCAATCA
TGGAAAAACG ATCCCCTGTC CGTGGACCCT CTCTGGGCCG CCTGGTTCGA CGGCTACGAA
CTGGGGAGCG GTGGAGCCCC CCGGGAAAAA GAAAATGCGG GGAACGCCGC GGACACATCC
CCCTACACCG TTCCTCCGGA AAGCGCGGAA CGCCGCGGGC GCGTCAACCA GCTCATCCGG
GCCTACCGGG TCATGGGACA CCAATGCGCC CGCTTTAACC CGCTGGCTCC TCCGGACCAG
ACCGGTTGCC CCGTCAATCC GGAAGATATG GGATTCCGAG AGGAGGATAT GGACCAGCCC
GTCAACATCG GCACCTTCAT GGACGGAGGA ACGTTCACGC TCCGTGAAAT CATCACTAGG
CTGCAAAAAA TCTATTGTGG AGCCATCGGA TTTGAATACC ACCACATAGA CAATCTTAAA
ATCCGCTCCT GGATTGAAGA AAAAATCCAG CTCCGGGCAA ACGGCGTGGA TTATGGCCCG
GAAGTCCGGA GAGAAGCCTT GTTCCATCTC TGCAAGGCGG AACTGTTTGA GGAATTCCTG
GGCAAGCGCT TCATGGGGGA AAAACGCTTT TCCCTGGAAG GAGGGGAAGG AGCCATCGTC
CTGCTGGACG CCATGATCAA GCGCTGCCCC GCCGCCGGAG TCTCTCACAT TGAAATGGGC
ATGGCCCACC GCGGAAGGCT GAATGTGCTC GCCAATATTC TCCACAAACC GCTGAAAACC
ATCTTCCGCG AATTCACGCC GGACTACCTG CCGGAATCCC CCATCGGCAG GAGCGACGTC
AAATACCACC TCGGTTACGC CGCCACACGT CATGTGGACG GTAAAGAACT CCATATCCGC
CTTTCCTCCA ATCCCAGCCA TCTGGAAGCC GTGTATCCTG TGGTGGAAGG CAGGGCCAGG
GCCATGCAGC ACAACCTGCA AGACGCGGAA CGCAAGCGTG TGCTGCCGCT CGTCCTGCAC
GGGGACGCCG CTTTCTCAGG ACAGGGCATC GTGGCGGAAG TACTCAATCT CTCCCTGCTG
AAAGGTTACC GCACGGGCGG CACCGTGCAC CTCGTCATCA ACAACCAGAT CGGCTTCACC
ACCAGCCCGG ACGAAGCCCG CTCCTCCCGC TACGCCACGG ACGTGGCGCA GATGCTCCAA
TCCCCCATCC TGCACATCAA CGGAGAAAGC CCGGAAGACC TGGTGTGGGC GGCGGACTTC
GCGCTCCAGT TCCGCCAGGA ATTCGGAAGG GACATCATTC TGGACATGTA CTGTTACCGC
CGTCTGGGCC ACAATGAAAC GGACCAGGCC GCCTTCACCG CGCCCATGCA GACCAAGCGG
ATTGAGGCGC GCCCCACCGC TGCCGCCCTG TATGGGACGG CGCTCAGAAA GAGAGGGGAA
TTGACGGAAC AACAGGAGCG GGACATTCGG AATGACCTTT GGGAAGGTAT GGAACAGGCC
TACCTGCAAA TGAAGGAAAA CCCCGCGGAC TACATCCTGC CCGCCACCGC GCAGGATGCG
GATGAAACGC CCCTCCCGCG CACCAGCACG CGGACGGGAA TCAGTCCGGA ACTGTTCCAG
CGCGTCGGAA GTATCCTTAC GGAACTTCCG GACAGCTTCA CGCCCCACCC CACGCTGGAA
AAACGCTTCC TGGCCCGCCG CCGGGAAGCC TTCCGGGAAG GCGGCCTGCT GGACTGGGCC
ATGGCGGAAT CCCTGGCATG GGGCAGCCTG CTCACGGAAA ACCACACCGT GCGCCTGTCC
GGACAGGACT GCCAGCGCGG CACCTTCTCC CAGCGGCACG CCGTCCTGCA CGACTTCAAT
GACGGCTCCC TGTACACTCC CCTGGAAAAA CTGAACCACG GCACCACCGC ATTCCGCATT
TACAACTCAT CCCTGTCGGA AGCCTCCGTA TTGGGCTTTG AATACGGCTA CGCGCTGGAA
AGTCCGGACG CGCTGGTCAT GTGGGAGGCC CAATTCGGGG ACTTTTCCAA CGGGGCCCAG
GTCATCGTGG ACCAATTCAT TGCTGCCGCA GAAGCCAAAT GGAACCAGAA GAACCGCATG
GTACTTCTGC TACCCCACGG TTATGAAGGA GCAGGCTCGG AACACTCCAG CGCCCGCATG
GAACGCTACC TACAGCTTTG TGCGGATGAC AACATGCAGG TCATCAATCC CACCACTCCG
GCCCAGTATT TCCACGCCCT GCGCCGCCAG GTGCACCGGA ACGTGCACAA ACCCCTGATT
ATTTTCACGC CCAAAAGCCT GCTCTCCCGT CCGGAGGCCG TCTCCCCGCA CCGGGAATTC
CTGGCCTCCA CCCGTTTCCG CGAAGTGCTG CCGGATCCGG ATACTCCCGC GCCGGACCAG
GTCACGCGCG CCGTCTTCTG CACCGGGAAA ATCTATTATG ACCTGGCTGC CTACCGCAGG
GAACGGAATA TTTCAGACAC GGTAATCATC CGTCTGGAAC AAATCTATCC TCTGGCGCAG
GAACAGCTTA CCTATCTGCT GGCGCCCTAC CAAAAAGTGC GCGACTTCGT CTGGTGCCAG
GAAGAACCCT CCAATATGGG GGCCTGGGGC CACCTGCGGA ACAGGCTGGG ACGCCTCTTC
GCCACTTCCT TCCGCTATGC GGGCCGCCCC TCCATGGCCT GCCCTGCGGA GGGGGCCAAA
GCGCTGCACG CCGCCGCACA AAAAAGACTC ATCGCCGCTG CCTTCGGGCC GCGGGCCCAA
TCCTGA
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| Protein sequence | MNASIFSKLP PEEITALHQS WKNDPLSVDP LWAAWFDGYE LGSGGAPREK ENAGNAADTS
PYTVPPESAE RRGRVNQLIR AYRVMGHQCA RFNPLAPPDQ TGCPVNPEDM GFREEDMDQP
VNIGTFMDGG TFTLREIITR LQKIYCGAIG FEYHHIDNLK IRSWIEEKIQ LRANGVDYGP
EVRREALFHL CKAELFEEFL GKRFMGEKRF SLEGGEGAIV LLDAMIKRCP AAGVSHIEMG
MAHRGRLNVL ANILHKPLKT IFREFTPDYL PESPIGRSDV KYHLGYAATR HVDGKELHIR
LSSNPSHLEA VYPVVEGRAR AMQHNLQDAE RKRVLPLVLH GDAAFSGQGI VAEVLNLSLL
KGYRTGGTVH LVINNQIGFT TSPDEARSSR YATDVAQMLQ SPILHINGES PEDLVWAADF
ALQFRQEFGR DIILDMYCYR RLGHNETDQA AFTAPMQTKR IEARPTAAAL YGTALRKRGE
LTEQQERDIR NDLWEGMEQA YLQMKENPAD YILPATAQDA DETPLPRTST RTGISPELFQ
RVGSILTELP DSFTPHPTLE KRFLARRREA FREGGLLDWA MAESLAWGSL LTENHTVRLS
GQDCQRGTFS QRHAVLHDFN DGSLYTPLEK LNHGTTAFRI YNSSLSEASV LGFEYGYALE
SPDALVMWEA QFGDFSNGAQ VIVDQFIAAA EAKWNQKNRM VLLLPHGYEG AGSEHSSARM
ERYLQLCADD NMQVINPTTP AQYFHALRRQ VHRNVHKPLI IFTPKSLLSR PEAVSPHREF
LASTRFREVL PDPDTPAPDQ VTRAVFCTGK IYYDLAAYRR ERNISDTVII RLEQIYPLAQ
EQLTYLLAPY QKVRDFVWCQ EEPSNMGAWG HLRNRLGRLF ATSFRYAGRP SMACPAEGAK
ALHAAAQKRL IAAAFGPRAQ S
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