| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1683 |
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| Symbol | |
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| ID | 6274600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2040750 |
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| End bp | 2043326 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642613742 |
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| Product | cobyric acid synthase CobQ |
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| Protein accession | YP_001878282 |
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| Protein GI | 187736170 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
[COG1492] Cobyric acid synthase |
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| TIGRFAM ID | [TIGR00313] cobyric acid synthase CobQ
[TIGR01140] L-threonine-O-3-phosphate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTT TTTCACATGG CGGAGATTTA AAATCCCTGG CGGAGGATGC CTGCCGCCCG
GAACGGGATA TTTTGGACTT CAGCGTCAAC CTGAGGCCGG AAGGTATGCC GGAGTTCATC
GTTTCAGCAT TGTGGAAGGC CATGGAAAAC GCAGTACCCT ACCCTTCTCC GGATGCGGCG
GATCTGCGGG AACTGGCGGC GGTTCATTAC GGGCTTCCTT CCGGCTGCTT CGTATTTGGA
AACGGGGCCA ATGAACTCAT CCACGCTCTT CCGCGCGCAT TAAACCTTAA ACAGGCCGTC
ATTCCGGAAC CCGCTTTTTC CGAATACAGG CTGGCCTGCC TGCGCCACGG CACGGATATT
CTTTCCATCC GGACGGAGGA ACGGAATTCC TTCCTCCCGT CTCTTTGCCG TCTGGAGGAA
CAGGCCGCAG ACGGAAGCGC TGTTTTTCTG GCAAATCCCA GCAATCCGTC CGGCGGCCTG
CTGGACGCAG CGGCCCTGCA CAGGGTTGTC CAGAGCCGCC CCGAAGTCCT CTGGATCATT
GACGAATCTT TCATGGATTA CGCACAAGGA GCGGAATCGC TGCTCCATGA AGCAGCCCTC
CTTCCCAACC TGGTGGTTCT GCGCTCCCTG ACCAAATTTT ACGGCATGGC CGGCGTCCGG
TGCGGTTTTT CCATCTGTGC CGCTCCGCTC GCGGAGCGGC TGCGGCGATC CCTGCCCGCC
TGGAACGTGA ATGCCTTTGC GACGGCAGCG GTGAAGGCCG TGCTGGCACA ACCCTCCTCC
TGGGCAGACA GGGAACGCGC CCGGAACCGG GAACGCCGGG ACGACCTGTT CCGCAGGCTC
TCCTCCCTGC CGGGCGCCGC CGTACTCCCG TCCGAGGCCA ACTTCCTGCT CTTCCGCCTG
GCGGGGGCGC CTCATGGCCT GGCAGCCCGG CTCCTGAAAA AATACGGCAT CGCACTGCGC
GACTGTTCCA ATTATCCGGG TCTGGAAACG GGCTGCTGGT TGCGCTCCGG CGTCCGCACG
CCGGAGGAAC ACGCCCTGCT GGCGGAAGCT CTGCGCGCCG AACTGGCGGG AAACGGCCCC
TCCATTATCC GTAAGGCTCC CAAACCGGCC CTGATGATTC AGGGCACCTG CTCCGATGCA
GGAAAAAGCG TTCTCACGGC AGCCCTGTGC CGCATTTTCC TTCAGGACGG CTATCACGTG
GCACCGTTCA AGGCGCAGAA CATGGCTCTC AACTCCGGCG TAACTGCGCT GGGAGAGGAA
ATGGGCCGCG CCCAGCTGGT GCAGGCCCAG GCCTGCCGCA TTGATCCGGA TGCCAGAATG
AACCCCATTC TTCTCAAGCC CCATTCCAAT ACCGGCTCCC AGGTGATCGT GATGGGGCGC
CCCGTAGGCC GCATGGACGC GCGGGAATAC TTCACGGCTA AAAGGCGCTT CTGGCCGGAC
GTATGCAAAG CATACGATTC CCTGGCGGAC GAATATGAAC TCCTCTGCCT GGAAGGGGCC
GGAAGCCCCG GAGAAATCAA TCTGAAATCA GCAGACGTGG TCAACATGAA CATGGCCCGC
TACGCGCGTG CCAGAGTCCT GCTCGCCGGG GACATTGACC GTGGCGGAGT GTACGCCTCC
TTTCTGGGAA CGTGGATGAC ATTCGCCCCG TGGGAAAAAG AACTGCTGGC GGGGTTCGTG
GTCAACAAAT TTCGAGGAGA TCCGGATCTG CTGGCCCCGG CGCACAGCTA CATGCGGAAT
CGTACGGGCA AGCCTGTGCT GGGCGTCATC CCGATGATGC GGGACATCAA CATTCCGGAA
GAAGACCGCG CCACGCTGCC CCCTGGCCAC GGGGAGCACG GGAAACATGC GGATTGCCTG
GATGTGGCCG TAGTCATGCC CGCCCACGTC TCCAACTTCA CGGACTTCGC CCCTCTGGCG
GCGGAGCCGG ACGTCCGGCT CCGCCAGGTG CGGACACGGG AGGAATGGGG AAATCCGGAC
CTGGTCATTC TGCCCGGCAC TAAAAGCGTG GCTGCGGACC TGGCTTCTCT CCGTTCCGCC
GGGCTGGAAG AACCCATCCG CCGTCATGCC GAAAAGGGAA AGTGGCTTCT GGGCGTCTGC
GGAGGGCTGC AAATGCTGGG GACGGACATT CTGGACCCGC TGCACATGGA ATCCCCGGAG
GAGCGCACGC CAGGACTGGG GCTGCTGGAA CTTTCCACCA CCTTCTCTTC AGCCAAAACC
CTGATCAACG TGCGCCGGGC AAGCACGCCG CTGCCTGTTC CCGCCGCAGG TTATGAAATC
CACCATGGCG TCACCAGCCA TCAAGAATCC AGCCCCCCCG TCATGTTCCG GGAAGACGGC
TCCCCCTGCG GCTACGGCAA AGGCCGTATC TGGGCCACGT ATCTGCACGG CATGCTGGAC
GGAGACCAAT TCCGCCGCGC ATTCATCAAC ATGGTCAGGA AAGATTCAGG GCTGAAAGCC
AACCCAGCCC TGCACACCGC CTATGACCTG GACGGAGCGC TGGACCGCCT GGCGGACGTG
GTCCGGAAAC ATCTGGACCT GAAAACCATT TACCGAGCTC TCCAACTAAA ACGCTGA
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| Protein sequence | MNVFSHGGDL KSLAEDACRP ERDILDFSVN LRPEGMPEFI VSALWKAMEN AVPYPSPDAA
DLRELAAVHY GLPSGCFVFG NGANELIHAL PRALNLKQAV IPEPAFSEYR LACLRHGTDI
LSIRTEERNS FLPSLCRLEE QAADGSAVFL ANPSNPSGGL LDAAALHRVV QSRPEVLWII
DESFMDYAQG AESLLHEAAL LPNLVVLRSL TKFYGMAGVR CGFSICAAPL AERLRRSLPA
WNVNAFATAA VKAVLAQPSS WADRERARNR ERRDDLFRRL SSLPGAAVLP SEANFLLFRL
AGAPHGLAAR LLKKYGIALR DCSNYPGLET GCWLRSGVRT PEEHALLAEA LRAELAGNGP
SIIRKAPKPA LMIQGTCSDA GKSVLTAALC RIFLQDGYHV APFKAQNMAL NSGVTALGEE
MGRAQLVQAQ ACRIDPDARM NPILLKPHSN TGSQVIVMGR PVGRMDAREY FTAKRRFWPD
VCKAYDSLAD EYELLCLEGA GSPGEINLKS ADVVNMNMAR YARARVLLAG DIDRGGVYAS
FLGTWMTFAP WEKELLAGFV VNKFRGDPDL LAPAHSYMRN RTGKPVLGVI PMMRDINIPE
EDRATLPPGH GEHGKHADCL DVAVVMPAHV SNFTDFAPLA AEPDVRLRQV RTREEWGNPD
LVILPGTKSV AADLASLRSA GLEEPIRRHA EKGKWLLGVC GGLQMLGTDI LDPLHMESPE
ERTPGLGLLE LSTTFSSAKT LINVRRASTP LPVPAAGYEI HHGVTSHQES SPPVMFREDG
SPCGYGKGRI WATYLHGMLD GDQFRRAFIN MVRKDSGLKA NPALHTAYDL DGALDRLADV
VRKHLDLKTI YRALQLKR
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