| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1646 |
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| Symbol | |
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| ID | 6274630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1989053 |
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| End bp | 1990252 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613706 |
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| Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
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| Protein accession | YP_001878247 |
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| Protein GI | 187736135 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0761] Penicillin tolerance protein |
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| TIGRFAM ID | [TIGR00216] (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.182674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCAGG ACTCAACCCG CAAAGCCAGA GTGAATGTGA GACGGGCCGA AGTAATGGAG
CAGGTGGAAA AGGAAATCCA GCAGCATTAC CAGAGTGAAT TGATTTCCCA CATCCGTTCT
GCGGGCAATG TGTACAATCT GGGCCATACG GAATTTTTTC TCGCCCGGGA GTTCGGGTTC
TGCAACGGCG TGCGCCGTGC TATTGATATA GCATATGCGG CACGCAGAGT GTTTCCTGAC
CGGCGGATTT TTCTGATTGG GGACATTATT CACAATCCGG AAGTGAACCG GCAGCTGGAG
GAAATGGGCA TTCGAAAACT TCCCTGGAAG CAGTTGGATT CCTCCTATGA CCGGGTTGCT
CCGGACGATG TGGTGATTAT TCCCGCGTTC GGTGTTCCCA CTCCTTTCAT GGATGCGCTG
GAGGAGAAGG GCGTGCAGAT TGTGGATACG ACATGCGGGG ACGTGATGAA GGTCTGGAAA
AGAGTGAAGA ATTACGCCGC CATGGGGATT ACCTCCATTA TCCACGGTAA GGCTACCCAT
GAGGAAACCA GCGCTACGGC TTCCCGGGCT CTTGGGGAAC GGGGAAGGGG GAAATACCTG
GTGGTTTACG ATTTGGAGGA TGCCCGTATC CTGTGCGACT ACATCATGGG CCGCGGAGAC
CGCGAGGCAT TCCTGAAACG GTTTGAAGGA TGCTGTTCCC CGGGATTCGA TCCCGACCGG
GATCTGGAGG AGGTTGGCAT CGCCAACCAG ACCACCATGT TGAAAACGGA GACGCAGACG
CTCCAGAAGA TGGTGAAGGA TGCCATTGTT CAGAGGGATG GGGACGATGA TAATTTTTAT
GTGTTTGACA CCATTTGCGG TGCTACCCAG GATCGCCAGG ATGCCCTGTA TGAACTGCTT
AAAAATCCTC TGGACGTCAT GTTTGTGGTG GGTGGCTACA ACAGTTCCAA CACAACGCAT
CTGGTGGATA TTGCCAGGGA GCATGTGCCC ACGTACTTCA TTGAGTCCGC AGAATGCATC
AAGTCCATCC AGTATGTGGA TGCTTTTGAT ACGAAGACGC GGGAAGTGCG CCGCATGACT
ACGGAACCGG TAGTGCAGAA TCTGGGCAAA TCCCTGAAGG TGGGAATTAC GGCGGGCGCC
TCATGTCCGG CCAACCTGAT TGAGGCCACC ATCCTCCGCA TTGCGGATCT GCGCAAGTAG
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| Protein sequence | MNQDSTRKAR VNVRRAEVME QVEKEIQQHY QSELISHIRS AGNVYNLGHT EFFLAREFGF
CNGVRRAIDI AYAARRVFPD RRIFLIGDII HNPEVNRQLE EMGIRKLPWK QLDSSYDRVA
PDDVVIIPAF GVPTPFMDAL EEKGVQIVDT TCGDVMKVWK RVKNYAAMGI TSIIHGKATH
EETSATASRA LGERGRGKYL VVYDLEDARI LCDYIMGRGD REAFLKRFEG CCSPGFDPDR
DLEEVGIANQ TTMLKTETQT LQKMVKDAIV QRDGDDDNFY VFDTICGATQ DRQDALYELL
KNPLDVMFVV GGYNSSNTTH LVDIAREHVP TYFIESAECI KSIQYVDAFD TKTREVRRMT
TEPVVQNLGK SLKVGITAGA SCPANLIEAT ILRIADLRK
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