| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1642 |
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| Symbol | |
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| ID | 6275721 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1984993 |
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| End bp | 1985775 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642613702 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001878243 |
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| Protein GI | 187736131 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0623] Enoyl-[acyl-carrier-protein] reductase (NADH) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 0.657325 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAGTA AATTACTCGA AGGCAAAGTT GGTGTCGTAG TCGGCGTAGC GAACAAGCGC
AGCATCGCGT TCGCAATTGC CAAGGCGTGG CATGAAGCGG GCGCAAAGCT CATCTTCAAT
TATCAGGGAG AACGTCTCAA GGACGGAGTT CTCAAGCTGA TCCATGAGAA CTTCGGAGAG
GATGTTCCCG TTTATGATCT GGATGTCAGC AGTGATGAAT CTGTTAACGC TTTCTTTGAA
AGGGTCCGCC AGCATACGGA TAAAGTAGAT TGTCTGCTGC ATTCCGTGGC TTTTGCCCCG
AAGGAGGCTC TTGGCGGCAG TTTCCTGGAA ACGGGCCGCG AGGCGTTCAA GATTTCCCTG
GATATCTCCG CTTATTCCCT GGTAGCTCTT TCCCGCGCCG TGGAACCCAT GATGTCCGAC
AACGGCAGCA TTTTGGCGAT GTCCTATCTG GGATCCGAAA AAGTGGTTCC TAACTACAAT
CTGATGGGAG TTTCCAAAGC TGCCCTGGAA GCCTGCACCC GTTATCTGGC TTATGATTTG
GGCCGTTCCC GCGGTATCCG TGTCAATTGC ATCAGTGCAG GCCCCATGCA GACGCTGGCT
GCTCGCGGCG TTTCCGGTTT TAACACCATG TTCAAGGTGT ATGAGGAGCA TGCCCCTCTG
GGCCGTTCCT GCACGGGTGA GGAATTGGGA GCCACCGGCG TTTTCCTGGC CAGTGACGGC
GCAGCCGCAA TCACCGGGCA GGTGATTTAC GTGGACGGCG GTTATCAGAT CATGGGAATG
TAA
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| Protein sequence | MSSKLLEGKV GVVVGVANKR SIAFAIAKAW HEAGAKLIFN YQGERLKDGV LKLIHENFGE
DVPVYDLDVS SDESVNAFFE RVRQHTDKVD CLLHSVAFAP KEALGGSFLE TGREAFKISL
DISAYSLVAL SRAVEPMMSD NGSILAMSYL GSEKVVPNYN LMGVSKAALE ACTRYLAYDL
GRSRGIRVNC ISAGPMQTLA ARGVSGFNTM FKVYEEHAPL GRSCTGEELG ATGVFLASDG
AAAITGQVIY VDGGYQIMGM
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