| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1563 |
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| Symbol | |
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| ID | 6273853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1881333 |
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| End bp | 1882250 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613623 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_001878165 |
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| Protein GI | 187736053 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.324691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCAG AAGCGCTGAA AGGACATATC GCGATGGGAG CGGCGGCCGT CATCTGGGGC
CTCATGTCTC CCGTCAGTAA ACTGGTCATG CAGCAGGGAG AAGTAAGTTC CGCCTCTCTC
GCCACATTCC GCCTGCTGGG AGCGGCCCTC CTGTTCTGGC TGGCCTCCGC TTTCGTGCCA
AGGGAACCCA TAAAGAGGAA GCATCGGCTG CCTCTGTTTT ACGCCTCCCT GTTCGGAATC
ATTTTCAACC AGATGGCCTT CACGGTGGGC GTAGGGTTCA CTTCCCCGGC GGATGCGGCC
ATCATCACCA CCATTACACC GGTATTGACC ATGATTCTGG CGGCGTTCGT CCTCCGGGAA
ATGGTCACGG GGAAAAAAAT CATCGGGGTC TGCGCCAGCG CCATCGGAGC CATGCTGCTG
GTTTCCGGCA GCGGCGCGCA TGCGGCGGCC CTACCGGGAG ACAACAACCT GCTGGGGGAC
ATTCTCTGCC TGGCTTCCCA GTGCAGCGTA GCCGTTTACT TTGTTTTTTT TAAGAACCTG
ATTGGCAGAT ACTCTCCCGT CACCCTGCTG AAATGGATGT TTACGTATGC CGCAGCCGCC
TGCCTCCCCT TCACCTTCCG GGAAGTGGGT TCCATCCATT ATTCCGCTCT GCCCGTACAA
ACATGGCTGG GCATTGCCTA TGTGGTGGCT CTGGCTACTT TTGTCAGCTA TATCTGCCTG
TCTTTCGCCC AGCAGAGGCT GAAACCCACC GCCGTCAGCA TGTACAATTA CTGCCAGCCG
GTGATCGCAT CATCCGTAGC GGTGATGTGG GGCATGGACC ACTTCGGATG GATGAAAGTC
CTCTCCGTCC TGCTGGTATT CACAGGTGTG CTTCTGGTCA CCGGAACCAG GGGAAAACGG
GCCGTCCAGG AACAATAA
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| Protein sequence | MPSEALKGHI AMGAAAVIWG LMSPVSKLVM QQGEVSSASL ATFRLLGAAL LFWLASAFVP
REPIKRKHRL PLFYASLFGI IFNQMAFTVG VGFTSPADAA IITTITPVLT MILAAFVLRE
MVTGKKIIGV CASAIGAMLL VSGSGAHAAA LPGDNNLLGD ILCLASQCSV AVYFVFFKNL
IGRYSPVTLL KWMFTYAAAA CLPFTFREVG SIHYSALPVQ TWLGIAYVVA LATFVSYICL
SFAQQRLKPT AVSMYNYCQP VIASSVAVMW GMDHFGWMKV LSVLLVFTGV LLVTGTRGKR
AVQEQ
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