| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1500 |
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| Symbol | |
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| ID | 6274640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1789901 |
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| End bp | 1790863 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642613560 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_001878103 |
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| Protein GI | 187735991 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.101957 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 0.04925 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAAAC ATTTATTCCT TGCATGTGCC CTGGCGTTCG GCCTGTCCGC CTGTTCCCAG
CACCAGGAGC AGCCGGCGGA GTCCGGTTCT CCGGTGAAAA CGACCATTTC TCCCGTGACT
GCTCCTGGGA AAAAGCCGGA CCGGCCGGCC GTGAAATTGC CTCCCAAGTC CGTTCCGGTG
CCTTCCGTAA GCCCGTCCTA TAATAATACT CCTCTTTCCC CGCGCATTCC GGGGGTAACG
GTCAACCGTG TGGCTGTGCC GGACAAGGTG GTGGCCCTCA CCTTTGATGA CGGTCCCCAT
GGAACGCTGA CCCCCAGGGT GCTGGACATC CTGCGCGACA ATAACGTCAA GGGTACTTTC
TTCATGCAGG GCTGCAATGT GAAGGCCCAT CCCCAGGTAG TGCGCCGCAT GGTCAATGAG
GGCCATGAAG TAGGCAACCA TACATGGAAT CACGTTTATC TGAGCAAAGT GCCCCGCGAA
AAAGCGGAAT CCCAGCTCCA GAGCACTAAT GAAGCCATCC GCAACGCCTG CGGCGTTGTC
CCCGTGGTCA TGCGCCCCCC CGGCGGCTAT ACGAATGCAG GCGTGGCGTC CTGGGCCCGC
CAGCGCTTCG GCTTCACCAC GGTCATGTGG GATGTGGACA CGAATGACTG GCGCAAGCCC
GGCTCCTCCG TGGTGGCCGC CCGCGCCGTG AACGGCGCCA AACCCGGCTC CATCATTCTG
GTGCATGACA TTCACGCTTC TACGGTGGCG GCGGTGGACG CCATTGTGAA GGGATTGAAA
AACCGCGGCT ATGAACTGGT GACCGTTTCC GAACTTATCA GGAGAGGACG TGCCGCCGCC
GGCCATGCTC CTTCCATGCC CGCGGCTCCT GCTGTTCCGG ATTCTTCTCC CCTTGCCGTT
CCTGCGATTG TGGCTCCCGC GGAGCCTGTT CCCGCTCCGG CGGAGACGGT GGCCGGCATG
TAA
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| Protein sequence | MKKHLFLACA LAFGLSACSQ HQEQPAESGS PVKTTISPVT APGKKPDRPA VKLPPKSVPV
PSVSPSYNNT PLSPRIPGVT VNRVAVPDKV VALTFDDGPH GTLTPRVLDI LRDNNVKGTF
FMQGCNVKAH PQVVRRMVNE GHEVGNHTWN HVYLSKVPRE KAESQLQSTN EAIRNACGVV
PVVMRPPGGY TNAGVASWAR QRFGFTTVMW DVDTNDWRKP GSSVVAARAV NGAKPGSIIL
VHDIHASTVA AVDAIVKGLK NRGYELVTVS ELIRRGRAAA GHAPSMPAAP AVPDSSPLAV
PAIVAPAEPV PAPAETVAGM
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