Gene Amuc_1483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1483 
Symbol 
ID6274660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1773388 
End bp1774200 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content56% 
IMG OID642613543 
Productzinc/iron permease 
Protein accessionYP_001878086 
Protein GI187735974 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.287328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.134401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCTTT CCGCCGACCA CATCCTCGTT GTCTTCCTGC TCACCACGCT GGCTGGTCTT 
GCTACCGGCA TAGGAGGCTT CATCGCCTTC TTCATGAAAA GGACGGATAC AAAGGCACTT
ACTTTTGCCC TGGGATTATC CGGCGGAGTC ATGGTGTATA TCTCCCTGGT GGAACTGCTG
GGAGAAGCCC AGCACAGGTT GATGGAGTTC GAAGGCCATA CGGCAGGTTC CTGGATCGCC
ATTGCTTCCT TCTTCGGGGG AATTGCCGTG GCGGCTCTGA TTGATTACCT GGTTCCGGAA
GACGAAAACC CGCACGAAGC GCGCGGACCG GAAGACATCC ATGGACAGGC CAGCGGTGAA
TTTTCCTCAT CCCGAATTAA AAGGTCCGGC ATTCTGTTCG CCCTGGCCAT CGGCATCCAC
AATTTCCCGG AAGGAATCGC CACCTTTGCC GCCGGATTGG ACTCCCTGAC TTTAGGCACC
TCCATCGCCC TGGCCGTAGC CGTCCATAAC ATTCCGGAAG GAATAGCCGT GGCGGTACCT
CTTTACTACG GTACGGGCAG CCGTAAAAAG GCCCTTTTTT ATTCCTTTCT CTCCGGTCTG
GCGGAACCGG TGGGCGCGGC CATCGCCATG TTCTTCCTGT TCCACTTCCT CACACCTACC
GTACTTGCGG TTCTCTTTGC CTCCGTCGCG GGAATCATGG TCTTCATCTC CTTTGACGAG
CTGCTGCCCA TGGCGGAACG CTGGGGACAC CATCACATTT CCATCATGGG CATCATCGCC
GGAATGCTGC TGATGGCGAT TGTCCTGATC TGA
 
Protein sequence
MDLSADHILV VFLLTTLAGL ATGIGGFIAF FMKRTDTKAL TFALGLSGGV MVYISLVELL 
GEAQHRLMEF EGHTAGSWIA IASFFGGIAV AALIDYLVPE DENPHEARGP EDIHGQASGE
FSSSRIKRSG ILFALAIGIH NFPEGIATFA AGLDSLTLGT SIALAVAVHN IPEGIAVAVP
LYYGTGSRKK ALFYSFLSGL AEPVGAAIAM FFLFHFLTPT VLAVLFASVA GIMVFISFDE
LLPMAERWGH HHISIMGIIA GMLLMAIVLI