Gene Amuc_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1463 
Symbol 
ID6275708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1753731 
End bp1755521 
Gene Length1791 bp 
Protein Length596 aa 
Translation table11 
GC content55% 
IMG OID642613523 
Producthypothetical protein 
Protein accessionYP_001878066 
Protein GI187735954 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAACC CCGTGGCCTC CCTGCTTTTT ATTCTCGCAA TGTTGACAGG GCCATGCCCG 
GCAGCGGATT ATCCGGAACG GACGGAGCGC ACGCAATCCG CAGGGAACCA TGTCTGGCAT
ATAGACCCGG ACAAGGGAAA TGACGGCAAT CCGGGAACGG CCCCATCCAC GGCGTGGAAA
AGCATGGCGC CGGCCAACCG TCTCATCATG GCGCGGGGAG ATACGCTCGT CATCCATCCG
GGGGAACATG CCGTCTCCCT GGCGCTGATG GGGGAAGGTT CCAAACAGGC CCCGGTCACC
ATCCGGTTCA TGCCCGGCAG GCATATCTTC AAACACGGTG CCCTGATGAC CGGAAAACCG
CAGATTTCCA ACACCAACGA TGCGCCCAAC GAGCCCAAGG CCATGGCTAT CCGCCTGATG
GAAGCCAAAA ACATACGCCT GGAGGGAAAG CCGGGAGCCA CCGACATCCT GCTGGAAGGA
AAAGCCATCT TTGTCTGCAT GGAACATGCG GAAAACGTTT CCCTGAACGG CCTGGGTTTT
GATTACCTGC ATCCGACCAT GGGAGAATTT CTGGTCACGG AAGTTGAAGG GGATACCATG
AAAGCAACTA TTCCGGACGG AACCCTGTAC ACAGTGAAGG ATGGAAACCT GACCTGGCAC
GGACCCGGCT GGGAATTCCG CATGGGAGGG TATTCCAAAG TTTTCGATTC CGCCTCCGGC
ACTTTCCAGG GCCGTTTCGA CCCCGGGAAA ACAGTCATCA GAGAATTGTC TCCCGGAAAA
ATCAGCATTA CGTTCAAGGA AGGCTCACCA ACCATGAAAC CGGGCCAATC CTACCAGAAC
CGCAATACCC GGAGGGACTG CTGCGGCTTC TTTCAATACA GAAGCAAAAA CATCCTCTGG
AATAACTGCC ATATTTACTA TATGCACGGC ATGGGCGTCG TTTCCCAGTT CTGCGAGAAC
ATCATGTTCA GCCACTTGAA AATAGCCCCG CGCCCCCGTT CCCTCCGCAC CAATTCCTCC
TGGGCGGATA ATCTGCACTT TTCCGGATGC CGGGGAAAAA TCATCGTCAA AGATTGCGTG
CTGGGAGCCT CCCATGATGA CGCCGTTAAT GTTCATGGAA CCCACTTGCG CATTATAGAC
AGGCCGGCCC CCAACAAAAT CACCGTCCGG TTCATGCATC CCCAGACCTT CGGCTTTGAC
GCCTTTGCCG CAGGAGACCG GATCGATTAT GTTTCCTGCA ACACGCTGGT ACCTTATGCA
TCCAATACCG TTTCCGGCGT CAAACAACTC AATGAAAAGG AAATAGAACT TACATTGCAA
CATCCCAATC CCGGGAACAT CCAGCCTGAC GATGTTGTGG AAAACGTCAC ATGGACGCCG
TCCGTCCACA TCAGCAATAC GGTATGCCGC CACATTCCCA CCAGGGGCTT CCTGCTCACC
ACTAGGAAGC CGGTGCTGGT TGAACGGTGC CGGTTTGAAA AAACGGGCAT GCCCGCCATC
CTGGTGGAAG ATGACGCCTC CGGCTGGTAT GAATCCGGCG TGGTCAGGAA CATGACCATT
TCCCGCAATA CCTTTATCCA ATGCGGAGAA GCCGTCATCC AGATCGTGCC GCACGCTCCA
CGGCCGGAAG GGGACGTTCA CCGGAACATC ACCATTACCG GAAACACGTT TGACCTCAAA
AACGGAACCG CCATCCGCAT TCGCCATACC GGTGACGTCA AGGCGGAGAA AAACACTTTC
ACCAAAGACG GGAAGAAAAT CCCTGAGGAA AAGGCGGTGG ATATCCGGTA G
 
Protein sequence
MQNPVASLLF ILAMLTGPCP AADYPERTER TQSAGNHVWH IDPDKGNDGN PGTAPSTAWK 
SMAPANRLIM ARGDTLVIHP GEHAVSLALM GEGSKQAPVT IRFMPGRHIF KHGALMTGKP
QISNTNDAPN EPKAMAIRLM EAKNIRLEGK PGATDILLEG KAIFVCMEHA ENVSLNGLGF
DYLHPTMGEF LVTEVEGDTM KATIPDGTLY TVKDGNLTWH GPGWEFRMGG YSKVFDSASG
TFQGRFDPGK TVIRELSPGK ISITFKEGSP TMKPGQSYQN RNTRRDCCGF FQYRSKNILW
NNCHIYYMHG MGVVSQFCEN IMFSHLKIAP RPRSLRTNSS WADNLHFSGC RGKIIVKDCV
LGASHDDAVN VHGTHLRIID RPAPNKITVR FMHPQTFGFD AFAAGDRIDY VSCNTLVPYA
SNTVSGVKQL NEKEIELTLQ HPNPGNIQPD DVVENVTWTP SVHISNTVCR HIPTRGFLLT
TRKPVLVERC RFEKTGMPAI LVEDDASGWY ESGVVRNMTI SRNTFIQCGE AVIQIVPHAP
RPEGDVHRNI TITGNTFDLK NGTAIRIRHT GDVKAEKNTF TKDGKKIPEE KAVDIR