Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1461 |
Symbol | |
ID | 6275805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1751967 |
End bp | 1752704 |
Gene Length | 738 bp |
Protein Length | 245 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642613521 |
Product | protein of unknown function DUF558 |
Protein accession | YP_001878064 |
Protein GI | 187735952 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.7294 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCT TTTTCCTCCC GCCTTCCGAA TGGGCTGCTC CCGCCTGGGA GCTGCGAGGG GATGAAGCGC ACCATGCCGC CAAGGTTCTG CGCCTGAAGC AGGGTGACTC CTGCATCGTG TTTGACGGTT GCGGCCGTGC GGCCCACGCT GTGGTGGCGG AACCTCCGCG CAGCTCCGGC GTGCTGCTGG TTCCGGGGGA GGAATGTCCT CCTTCTCCCC CCGTGGCCCA TTTGACGCTG TGCCAGGCTG TTCCCAAGGG GGCCAACATG GATCTCATTA TCCAAAAGTC TGTGGAACTG GGTGTTTCTG CCATTGTTCC GCTCGTGACG GACCGCACGA TCGTGCGCCT GAATGCCCGG GAGGCTGAGG CCAAAAGGCA GAAATGGCAG CGCATCGCCT TGGAGGCCTG CAAGCAGTGC GGCCAGAACA CGCTGCCGGA AGTGGCGCTT CCCGTTCCCT TTGCGGAATG GCTGCGCGGA GGAATTCCGG AAGGACTGAA TATTATCGCC TCTCTGGCGC CCGGAGTGCG ACCGGTCAGG GAAGTGCTGG AGACCGCCCG TTCCCGTTCC GTCCGTCACG CTTCTCTGCT GGTGGGGCCG GAGGGGGATT TTACGGACCG GGAGACGGCC ATGGCGTTGG AAGCGGGGTT TGTTCCCGTC ACGCTTGGCC CTATCGTTCT CCGGGTGGAG ACGGCCGCCT TTTTCGGCCT GGCCGCCATG CGGTACGCCC TGGACTGA
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Protein sequence | MARFFLPPSE WAAPAWELRG DEAHHAAKVL RLKQGDSCIV FDGCGRAAHA VVAEPPRSSG VLLVPGEECP PSPPVAHLTL CQAVPKGANM DLIIQKSVEL GVSAIVPLVT DRTIVRLNAR EAEAKRQKWQ RIALEACKQC GQNTLPEVAL PVPFAEWLRG GIPEGLNIIA SLAPGVRPVR EVLETARSRS VRHASLLVGP EGDFTDRETA MALEAGFVPV TLGPIVLRVE TAAFFGLAAM RYALD
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