| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1450 |
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| Symbol | |
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| ID | 6275688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1740871 |
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| End bp | 1742013 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613510 |
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| Product | Sel1 domain protein repeat-containing protein |
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| Protein accession | YP_001878053 |
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| Protein GI | 187735941 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGACG CTTCCCACAA CCACGGCGAG CAGGAAAACA CCGTCTCCAC CTATTCCGTC
GACGTAGAAA CCCTTCAGCA AATAGCTCTG AAAGGAGACG CCCAGGCGCT GTTCCAGCTG
GCAATCAACT ACGAACAGGG ACGCGGGGTG GCGGAAAACC AGCAGGAAGC CTTCTACTGC
TACCAGCAGG CGGCGGAACT GGGCCACGTT ACAGCCCAGC TCAACCTGGG ATGGGCTTAT
TCCAACGGCA TCGGCGCCCC TCAGGACAAC GACAAGGCCT TTTACTGGTA CCGGAAAGCC
GCCGAACAGG GGCACCCCAC CGCGCAATTT GACCTTGGGT TCTGCTATGT CAATGGCCTG
GGAGTGGAAA AAGACGAACA CCAGGCCATC GGCTGGTACA AAAAAGCGGC GGAACAGGGC
CACGCGGTAG CCCAGCTCAA CCTCGGCTGG ATTTATGCCA ACAGCCCCAG CCGGAAAAAC
TGGGAACAGG CCGTATACTG GTACAAGCAG GCTGCAGAAC AGGGAGACCC CCGCGCCCAG
TATAACCTGG CCTGGTGCTA TGGCAACGGA AGCGGAACCC CCAAAAACCC GCGGAAAGCC
GCTTACTGGT ACGAAGAAGC CGCCATGCAG AACCACGCTA CGGCCCAGTA CAATCTGGGA
TGGTGCTATG AAAACGGTTT CGGCGTGGAG CCGGATCTGG ACAAAGCGCT GGTATGGTAT
CACAAATCAG CCCTTCAGGG CCAGATTACG GCCCAATACA CGCTGGGATG GTGCTACGGC
AACGGCCGGG GCATGGAAGT GGACATGGCC AAAGCCGTCC ACTGGTACAC CAAAGCCGCA
GAACAGGGGC ATACAACAGC CCAGCTCAAC CTGGGGTGGT GCCATCTGAA CGGAAAAGGA
ACGCCCGTCA ACCGGGAAAA AGCCCTGAAA TGGTACCTTA AGGCGGCGGA ACAGGGCAAC
GCCACAGCCA TGTTCAATGT GGGCAACTGC TACGCCCACG GCTACGGCAT TGAGCAGGAC
GATAAACAGG CGGAAGAATG GTATCAGAAA GCCGTCCGGC ACGGCAACAA AAAGGCCGCC
AGCGCCCTGC GCCATCTGGC CTCCAAACAG GAAAAAGAGA AACAAACGGA CTCGGAGGCC
TGA
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| Protein sequence | MNDASHNHGE QENTVSTYSV DVETLQQIAL KGDAQALFQL AINYEQGRGV AENQQEAFYC
YQQAAELGHV TAQLNLGWAY SNGIGAPQDN DKAFYWYRKA AEQGHPTAQF DLGFCYVNGL
GVEKDEHQAI GWYKKAAEQG HAVAQLNLGW IYANSPSRKN WEQAVYWYKQ AAEQGDPRAQ
YNLAWCYGNG SGTPKNPRKA AYWYEEAAMQ NHATAQYNLG WCYENGFGVE PDLDKALVWY
HKSALQGQIT AQYTLGWCYG NGRGMEVDMA KAVHWYTKAA EQGHTTAQLN LGWCHLNGKG
TPVNREKALK WYLKAAEQGN ATAMFNVGNC YAHGYGIEQD DKQAEEWYQK AVRHGNKKAA
SALRHLASKQ EKEKQTDSEA
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