Gene Amuc_1430 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1430 
Symbol 
ID6274476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1716549 
End bp1716878 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content52% 
IMG OID642613487 
Productribosomal protein L31 
Protein accessionYP_001878033 
Protein GI187735921 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0254] Ribosomal protein L31 
TIGRFAM ID[TIGR00105] ribosomal protein L31 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.332477 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACATA TTTATACTTG CGTTCCCCTT GCGTCGGAAA CGCAATACAT CACCATGAAG 
AAAGATATTC ACCCCCAGTA TAATCCGGTC GTTTTTGTTG ACATCACCAC CGGACGCCGC
TTCATCACCC GTTCCACTGT TCGTTCTCCC AAGACGGAAG TTATTGACGG GGTTGAACAT
TTCGTGGTTT CCTGCGGTAT CACCTCTGAT TCCCACCCGT TCTTCACCGG CAAGAACCAG
TTTGTGGACA CGGAAGGCCG CATCGACAAA TTCCAGAAGC GCTTCGGCAC CGTCCGCCGC
AGCGGAGGCA AGCCCAAGCT CAACAAGTAA
 
Protein sequence
MKHIYTCVPL ASETQYITMK KDIHPQYNPV VFVDITTGRR FITRSTVRSP KTEVIDGVEH 
FVVSCGITSD SHPFFTGKNQ FVDTEGRIDK FQKRFGTVRR SGGKPKLNK