Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1396 |
Symbol | |
ID | 6274468 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1667480 |
End bp | 1669273 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642613453 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_001878001 |
Protein GI | 187735889 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000259545 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTCAT ACCGCACTCA TACCTGCAGC GAATTGCGCG CTGCGAACAT CGGCAAGCCG ACCACCCTCA TCGGCTGGGT AGATTCCGTC CGGGACCATG GCGGCGTCAT ATTTATCGAC TTGCGCGACC GCTCCGGCAT CACGCAGGTA GTCTTTCACC CGGAAGTCAA TCAGGATGTG GCGAAAGCCT CCCAGCAGCT CCGCTCCGAA GACATGATCC AGATTTCCGG CACCGTGGCC GCCCGCCTGA AAACGGATAC GGTGGACACG ACCAATGCGG ACCTCCCCAC CGGGGAAATC GAAGTCTCCG CAGACACCCT GAACGTCATC AACAAGGCTG ACGTGCTCCC CTTCCAGCTG GATCGGGCCC TCTCCAACGA AGACCTGCGC CTCAAATACC GCTTTCTGGA CCTGCGCCGC CCGACCATGG CCCGCAACAT GCAGATCCGC CACCGCGTCA CCAAATCCAC GCGCGACTAT CTGGACGAGC ACGGCTTTCT GGAAATTGAG ACGCCCATCC TCTCCAAATC CACGCCGGAA GGCGCACGGG ACTTCCTGGT GCCCTCCCGC CTGGCGCCCG GCAAATTCTA CGCGCTGCCC CAGGCCCCGC AGCAATACAA GCAGCTGCTC ATGGTAGCCG GCATGGAACG CTATTTCCAA ATTGCCCGCT GCTTCCGTGA CGAAGACCTG CGCGCGGACC GCCAGCCGGA ATTCACCCAG GTGGACATTG AAGCTTCCTT CATCACGCCG GAAGACATCT ACAACCTGGT GGAAGGCCTG CTCAAACGCG TGTACAAGGA ATCCCTGGGC GTGGACATTC CCACCCCCTT CCCCCGCATG ACCTGGAAGG AAGCAATGGA TCAGTACGGT TCCGACAAGC CGGAACGCCG CTTCGGCATG AAGCTAACGG ACGTCTCCTC CATCTTTGAA AACAGCGGCT TCAAGGTATT CGCCTCAGCC GTAAGCAACG GCGGCGTGGT CAAGGCCATC AACGCCAAGG GATTCGGTTC CGCCTCCGTT GGCCAGATTG ACGCCCTGAC GAAAACTGCC GTGGAAGCCG GAGCCAAAGG CCTGGCCTAC ATCAAGGTGC GCGAGGAAGA CTGGAGAAGC CCCATCTCCA AATTCCTTTC CGACGAAGAA AAACAAAAAC TCACGGAAGC CCTGGACATC GAAACAGGAG ACCTCGTTCT CTTTGCCGCC GGCCCGTGGG AACCCTCCTG CGATATCCTG GGCCGCGTGC GCCTGCAATG CGCCGAATTC ATGGAACTGC TCAAGGACAA CAAGGAACGC GACTTCCTGT GGGTTATTGA ATTCCCGCTG GTGGGCTGGG ATGAGGAAGA GCAGCGCTGG GTCGCCATCC ACCACCCCTT TACCCGCCCC GTCAAGGAAG ACGAACAAAA ACTGCTCAGC GGGGAACTCT CCGCAGACCT TCGCGCGCAG GCCTACGATG TGGTGCTCAA CGGCACGGAG CTGGGAGGCG GTTCCATCCG CATCCATGAA CGCGACCTGC AGTCCGCCAT GTTCAAGGCG CTCGGCATCA CGGAAGAACA GGCCCGCGAA CAATTCGGCC ACATTCTGGA CGCTTTCAGC TTCGGCGCTC CACCCCACGG AGGCCTTGCG CTGGGCCTCG ACCGCCTGGT CATGATGATT TGCAACGCGG AATCCATCCG CGAAGTCATC GCATTCCCGA AAAACAACCG GGGAGCGGAT CTGATGAGCG ACTCCCCCGC CGCCGCGGAA GACCGTCAGC TGCGCGACAT TCACATTCAG GTGAAACTGC CCGCTAAAAA ATAG
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Protein sequence | MNSYRTHTCS ELRAANIGKP TTLIGWVDSV RDHGGVIFID LRDRSGITQV VFHPEVNQDV AKASQQLRSE DMIQISGTVA ARLKTDTVDT TNADLPTGEI EVSADTLNVI NKADVLPFQL DRALSNEDLR LKYRFLDLRR PTMARNMQIR HRVTKSTRDY LDEHGFLEIE TPILSKSTPE GARDFLVPSR LAPGKFYALP QAPQQYKQLL MVAGMERYFQ IARCFRDEDL RADRQPEFTQ VDIEASFITP EDIYNLVEGL LKRVYKESLG VDIPTPFPRM TWKEAMDQYG SDKPERRFGM KLTDVSSIFE NSGFKVFASA VSNGGVVKAI NAKGFGSASV GQIDALTKTA VEAGAKGLAY IKVREEDWRS PISKFLSDEE KQKLTEALDI ETGDLVLFAA GPWEPSCDIL GRVRLQCAEF MELLKDNKER DFLWVIEFPL VGWDEEEQRW VAIHHPFTRP VKEDEQKLLS GELSADLRAQ AYDVVLNGTE LGGGSIRIHE RDLQSAMFKA LGITEEQARE QFGHILDAFS FGAPPHGGLA LGLDRLVMMI CNAESIREVI AFPKNNRGAD LMSDSPAAAE DRQLRDIHIQ VKLPAKK
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