Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1381 |
Symbol | |
ID | 6274455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1646222 |
End bp | 1647985 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642613438 |
Product | ABC transporter related |
Protein accession | YP_001877986 |
Protein GI | 187735874 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.0000341514 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACGG AATCCCAGCC CCTGATTGAC TGCCGGAACA TCCGGAAAAT ATTTCCGGAC TCCGCCGGCG TCCCCTTTGC GGCGGTGGAC GACGTCTCCT TCCGCCTGTC CGCCGGGGAA ATCGTAGGGT TGCTGGGGCC GGACGGAGCG GGAAAAACCA CTCTGATCCG CCTCATCACG GGATTGATGA AACCGCATGG CGGGTCTATC TCCGTCCTGA ATCTGGACTC CGTGAAAAAA AGCCGGTCCA TCCAGGCCTC CATAGGCTAC ATGCCGCAGA AATTCGGGCT TTATGAAGAC CTTACCGTCC GAGAAAACAT GGAGCTTTAC GCCCGCATGC ACGGCGTTTA CGGCCAGGAC AGGGAAAAGC GCTTCCGCAG CCTGCTCGCC ATGACCAGCC TGGAACGCTT CACCACGCGG CTTGCGGGAA AGCTCTCCGG CGGCATGAAG CAGAAGCTGG GCCTGTGCTG TTCCCTGGTC TCCTCCCCGC CCCTCATCCT GCTGGATGAA CCCACCGTGG GCGTGGATCC GCTCTCCCGG CGGGAACTGT GGAGCATCCT GAAACAATTC TCCGGAGAGG AAGGCGTGGG GGTACTGGTC AGCACCTCCT ACATGGACGA ATCGGCCTAC TGCAACAGAA CCCTCATCAT GTATGAAGGG CGCCTGCTTA TGGACGCCCC TCCCGCCGAC GTCATCGCCC GGGCGGAAGG AATGTGCGTG ACGGTGCGCA CGCCGGAGGG GCTGCATGCG CGCCAATTCC AGAGCAGGCT GGCCGCCGTG CCCGGCATCA TCAACGCCAC CCCGCAGGGG AACACCGTCC GCATCATCGT TCCCCACGGC CACCCCGCAC GGAAAAAGCT GGAGGAATAC CACCCCGCCC CCGCGCAGCC GGACTTCTCC GACGGCTTCA TGACCCTGCT TGCCGACCAA GTGGACCTCG CCCCGCAGGA CATCCCCGCC CCTGCCGGAA CGCCGGAACC GGAGCGGACG GAAAACGGCG GCACCGTCAT CCGGGTAACG GACCTTGTCA GGAAATTCGG CAGTTTCATT GCCGTCAACC ACGTCAGCTT CTCCGTCCGC AAAGGGCAGG TCTTCGGCCT TCTGGGCCCC AACGGAGCGG GGAAAAGCAC CACTTTCCGC ATGCTCTGCG GGCTGCTGCC CGCCAGCGGC GGCACGCTCA ATGTGGCCGG GGCGGATCTG CGGACCGCCG CCGCCAGGGC GCGCAGGAAA GTGGGATACG TGGCCCAGAA ATTTTCCATG TACGGCATGC TGACCACGCG TCAAAACCTG GAATTCTTCG CCGGAGCCTA CGGCATGTCC GGAAAGGAGC GGCAGGAAGC CATCCGCTCC ATGGAAGAAG AATTCCACCT GACTCCGTAC ATGAACGCCC CCGCCGCGCA CCTGCCCGGC GGCTACAAGC AGCGCCTCAG CATGGCGTGC GCCCTGCTCC ACTCCCCAGA CATCCTTTTT CTGGACGAAC CCACTTCCGG AGCGGACCCC CTGGCCCGGC GCGACTTCTG GCTGCGCATC AACGCCCTGG CGGAAAAAGG CGTCACCATC ATCATCACGA CGCACTTCCT GGGAGAAGCG GAATTTTGCG ATAACATGCT CATCATGATG GATGGAACCA CGCTGGCGGA AGGTTCCCCG GACGATATCC GCAAACACGC TCCCCCGCGT GAAGACGGAG CCCCCGCTTC TCTGGAAGAC GCCTTCCTGG CCATCACGGA AGAACACATG AAAAAAGGAG GAGGAGAAAC ATGA
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Protein sequence | MTTESQPLID CRNIRKIFPD SAGVPFAAVD DVSFRLSAGE IVGLLGPDGA GKTTLIRLIT GLMKPHGGSI SVLNLDSVKK SRSIQASIGY MPQKFGLYED LTVRENMELY ARMHGVYGQD REKRFRSLLA MTSLERFTTR LAGKLSGGMK QKLGLCCSLV SSPPLILLDE PTVGVDPLSR RELWSILKQF SGEEGVGVLV STSYMDESAY CNRTLIMYEG RLLMDAPPAD VIARAEGMCV TVRTPEGLHA RQFQSRLAAV PGIINATPQG NTVRIIVPHG HPARKKLEEY HPAPAQPDFS DGFMTLLADQ VDLAPQDIPA PAGTPEPERT ENGGTVIRVT DLVRKFGSFI AVNHVSFSVR KGQVFGLLGP NGAGKSTTFR MLCGLLPASG GTLNVAGADL RTAAARARRK VGYVAQKFSM YGMLTTRQNL EFFAGAYGMS GKERQEAIRS MEEEFHLTPY MNAPAAHLPG GYKQRLSMAC ALLHSPDILF LDEPTSGADP LARRDFWLRI NALAEKGVTI IITTHFLGEA EFCDNMLIMM DGTTLAEGSP DDIRKHAPPR EDGAPASLED AFLAITEEHM KKGGGET
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