Gene Amuc_1331 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1331 
Symbol 
ID6275840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1608167 
End bp1609486 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content58% 
IMG OID642613387 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_001877936 
Protein GI187735824 
COG category[C] Energy production and conversion 
COG ID[COG3202] ATP/ADP translocase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.865021 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value0.03557 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAGCG GAATGAAGGA ACGCCTGTGC CGGAGCCTGG AAAAGGTGCT GCATGCGGAA 
ACCCGCGAAT TGCCTGCCGC AGCGGGGGGA ATCCTCCTGT TTTTCCTGTT GTTCCTGGCC
TATTCCATGT TGCGGCCGGT CCGGGAGACG ATGGGCATTG CCGGAGGCGT TCAGAATCTG
CAGTGGCTTT TTACGGCTAC TTTCGCCGCT TCCATAGGGG GCCAGTTTTT ATTCGGATGG
ATTTCCTCAA AGGTGCGGAG AAAGGCCATT CTTCCGTGGA CGTACGGTTT TTTCATTCTT
AACCTGGCGG TTTTTGCGGC GCTTGTGCTG GCATGCCCGG GAAATGTCTG GACGGCCCGT
TTGTTTTATG TGTGGCTGTC CGTATTTAAC CTGCTTACCG TTTCCGTGGC GTGGAGCGTG
CTGTCGGACG TCATGAAGCC GGGGCAGATG AAACGCCTGT TTGCCCTGGT TGCCAGCGGA
AGCAGCCTTG GGGCCATGGC GGGGCCGGCG GTGACGGCCG CCCTTGCCGG AGTGGCCGGC
CTTTTGTGGT TGTTCCTTGC CGCCGCTGTT CTTCTGGCGC TGGCGATGCT GGCGGGAATG
TACCTGCACC GCTGGCGTGA CGGGAATTCC CCGGAAGATG AGGAAACGGG AGTTCTTCTT
CCGGCCGATT GCCGGGAACG CCCTCTGGGA GGGAACCCGT TTGCCGGGGC GTCTGCCGTA
TTCCGGTCTC CCTTCCTGAT GAGCATCGGG CTGTTCATCA TCCTGCTGGC CGGGACCAAT
ACGTTCCTGT ATTTTGAGCT GATGAGCGTT GTAGCGTCTT CCTTTCCTGA TCCGGTGCGC
CAGACGCAGG TATTCGGAGT GCTGGACGTT GTTGTTCAGG GGTGTACCAT GCTGCTTCAG
GTATTTCTGG CGGGACGCAT TGTTCGGAAA TTCGGATTGG CGGCGCTGCT GGCGGCTGTC
CCCGTTCTTA TTTCCCTGGG TTTTGTATGG ATGGCTTTCG CTCCGGTATT TGCCGTCGTG
GCCGTGGTGA TGGCGGTACG CCGCATCGGG GAATACGGAA TGGTGCGTCC CGGCCGTGAA
ATGTTGAATT CCGTATTGTC CCCGGAAGAA AAATATAAAG CCAAGAGCTT TATTGATACG
GTCCTTTACC GTGGCGGCGA CGCCGTCAGC GCATGGCTGA AAAGCTCCTT TAACGTGTTG
GGTGCCCATT CCCCGTGGGC CATGCTGGCC GGAGCCGCCA TTTCCTTTCT TTGGGCGGCC
ACCGGATTCC TGCTTGCGGA CAGGTTCCGG AAAATGGCCG GAGTACAGGG AAAGAAATGA
 
Protein sequence
MSSGMKERLC RSLEKVLHAE TRELPAAAGG ILLFFLLFLA YSMLRPVRET MGIAGGVQNL 
QWLFTATFAA SIGGQFLFGW ISSKVRRKAI LPWTYGFFIL NLAVFAALVL ACPGNVWTAR
LFYVWLSVFN LLTVSVAWSV LSDVMKPGQM KRLFALVASG SSLGAMAGPA VTAALAGVAG
LLWLFLAAAV LLALAMLAGM YLHRWRDGNS PEDEETGVLL PADCRERPLG GNPFAGASAV
FRSPFLMSIG LFIILLAGTN TFLYFELMSV VASSFPDPVR QTQVFGVLDV VVQGCTMLLQ
VFLAGRIVRK FGLAALLAAV PVLISLGFVW MAFAPVFAVV AVVMAVRRIG EYGMVRPGRE
MLNSVLSPEE KYKAKSFIDT VLYRGGDAVS AWLKSSFNVL GAHSPWAMLA GAAISFLWAA
TGFLLADRFR KMAGVQGKK