Gene Amuc_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1244 
Symbol 
ID6274716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1493533 
End bp1494264 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content56% 
IMG OID642613301 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_001877850 
Protein GI187735738 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5632] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAATA TTTCCACCAT CGCCACTTAT CTTGCCCGCT TTTCCGGTCA GCTCCAGCCC 
ATGCTGGAGA AAGTCCAGGG CATGGACCGC AGAACTTTTC TGCTGGAAAC CGCCGCCCTG
CTTGCCCTGA CCAGTTGTTC GGAACCTTCC GGAAAAGCAG GAATGGCTCC CATGATCTCC
TTTAAGCCCT CCGGGGTCCC CGTGGTGAAA CGTTCTCCGC GCCAATTGCT GGCGGAATGT
AACGTCCGGC CGATGTTCAT GCCTAAATCT TCTCCGCTCC GCCGCCGTTC TTCCCGAATG
AAGCCGCGCT TCATCACCAT GCACAACACG GAAAACCCGT CCGCAGACGC CATGCAGCAT
GCGCGCGCCC TGAATAACGG AGCTTTGCGC TGCAACTGGC ATTATACGGT AGACCCATAC
GTGACCATGC AGCATATCCC CCTGAATGAA ACGGGACGCC ATGCAGACCG GGGCGGCCCC
GGAGACATGT ACTCCATCGG AATTGAAATG TGTGAGAAGC GAGGACAGAG CATCGTCAAA
ACCTTTGACC GCGCTGCCAA GCTGGCGGCC TACAACATGT ATGCCCACGA TATTCCCCTG
AGGAATGTCG TGCCCCATTA CTACTGGACC GGCAAGCGTT GCCCCCACCT TCTGCTGGAC
AATGGCAAAC CCGGCTTCAA ATGGTCTTGG TTCATCTCCC GCGTGGATTA TTATTACCGC
TGCATCAGCT GA
 
Protein sequence
MSNISTIATY LARFSGQLQP MLEKVQGMDR RTFLLETAAL LALTSCSEPS GKAGMAPMIS 
FKPSGVPVVK RSPRQLLAEC NVRPMFMPKS SPLRRRSSRM KPRFITMHNT ENPSADAMQH
ARALNNGALR CNWHYTVDPY VTMQHIPLNE TGRHADRGGP GDMYSIGIEM CEKRGQSIVK
TFDRAAKLAA YNMYAHDIPL RNVVPHYYWT GKRCPHLLLD NGKPGFKWSW FISRVDYYYR
CIS