Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1228 |
Symbol | |
ID | 6275772 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1475565 |
End bp | 1477763 |
Gene Length | 2199 bp |
Protein Length | 732 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642613284 |
Product | DNA polymerase III, subunits gamma and tau |
Protein accession | YP_001877834 |
Protein GI | 187735722 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
TIGRFAM ID | [TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 0.0388635 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTTACC AGGTCTTTGC CAGAAAATAC CGTCCTCTGA CATTCGATGA CGTCCTTGGA CAGGATCATG TTGTCCGGAC GTTGAAAAAC GCCATTGAGC ACAACCGTCT CGCCCATGCC TATCTCTTTG TAGGTCCCCG TGGAACGGGA AAGACATCAA CCGCAAGAAT TTTTGCGAAA GCTCTAAACT GCAGCGGTGG GCCCAAAGTG GATTTTGACC CGCATGAAGA TATATGTGAA GAAATTGCAG AAGGGCGGAG CCTGGATGTT CTTGAAATAG ACGGAGCATC CAACCGCGGC ATTGATCACA TCCGGGATCT CAGGGACAAC GTACGGTTCG CTCCGAGCAG AGGAAATTTC CGTATCGTCT ATATAGATGA AGTGCACATG CTCACTAAGG AATCCTTCAA CGCCCTGCTC AAAACGCTGG AAGAACCGCC ACCTCATGTC AAATTTATTT TCGCAACCAC GGAACCCCAT AAAATACTGC CAACCATTCT ATCGCGATGC CAGCGCTTCG ACCTGCGCCC CATCCCTTCT GAAATCATTG CAGAACACCT GCTCCATATC GCTTCTGCAG AGGGAGTAAG TTTGAGCAGG GAAGCAGCCT TTGCTGTCGC CAAAGTGGCG GATGGAGGTA TGCGGGATGC ACAATCCATG CTGGACCAGC TTGTTTCCTT CTGTGGAGAT CATATTGAAG AACAGCAGGT ACTCCACATT TTCGGCATTA CTTCCCGGGA GACCGTGGCC CATGCTCTGG CGCTTATTTT GAACAAGGAA CTTCCCTCTC TCCTGCATCT TCTGCATGAA CAGGCGGAAG CAGGAAGAGA CATGAGCCAG TTCCTTTCCG AAATTATCTC CGCCGTGCGT GAAATCCTGG TCTCTAAAGT AGATCCAGAA GCCAGCTTTG ATTCTCTCCC GGAATCCTCC AAGGAGGAAC TCGCCGAATT GGTCAAACGC ACCCATACGG ACAAAATCCT GCGTTTGGTG GAAGTTCTGG CGGAAACGGA AGATAAAATG CGCTGGTCCA CCAATAAAAG GCTTCATCTG GAAATGGGCC TGATTAAAGC CGTTCATACT CTGGCTGAGG CCAGCATCAG CGATATTATC ATGGCGTTGG AAGGTGCTCC GCTAGCCACC GCGGCACCGG CCTCTTCTTC AGATCTTGCT TCACAGCAGG AACCAAGTAC ATTTATTTCC TCCGCCACGG CACCCACTCC GGCCCCCCGG CAAAACATCC AGTCTCCTGT TGCTGCAACA AACCCAACCC CAGCTACGGA AGAACATTTG ATGGATCCGA TTCCAGATTT TTCTTTGTCT TCCCCTGCTT CATCTCCCGC AGTACAGAAA ATTCAGAGCA CTGACGCTCA AGCTTCTCCC CATCCTACGC AGGAAGCCGA ACCACAACAG GAAACTCTTA CACCCGCTGC CCCCCCCACC TCTCTTGCCG TTGCAGAGGA AGAATTTCCC TACTCCGCCA CTAAATTGCG GACAAAAACC GTACCTGCCT CCGAAGAAAT CACCCGGCAT CCAGACTCCG ATGCCTCCGA TGTGTCGAAA TTTCCTACGG ATTCTCCAGA GCCTACTTTT ATGGATCCAG AGGAAAATCT TCCTCTGGAA AGACGAACTA ACAGTTTCTT TGACAATCTA TTCGATACTC CAAGCACATC ATCCCAAACC CAGGCACCCG TAGAAAAAGA GGAACCGGCA GTTCTGTCCC AACAATCAGG AAGAACAATC ACGGAAGAAG ACTGGAAAAC GGTGTTGGAA CAAATGTCCG CCAAATTCCC TCTTCAAGCG GACTTTCTAG CCAACAGCGT TTTTTCCGGT TATGATGGTG TAGCAGTCGC CATTTCTTTT CATCCTTCTG ACCGTCAGGG GATGGACAGT CTTGGAACCG GCCCTCTGCG AACAGCTTTG GAAGCTGCTC TTTCCCAATA TATTGGAACC TCTGTTACTA TTTCTATCCG TCAGGATTTC TCCATTCCCG AACCCGTGCA GGAAGAACTG GCTCCTCTGC CTGCACCACC TCCTTCCGCA TCCACCATTC CTGCACCTAA ACCTCATACC CCGCAGAAAA AAACCGCAGA GCCTGTCCAG GAAGCTTCCA AAGAGGAAAA TGAAGATAAC TCTTACTACA CGGATCCGCT GATTGATGCT GCTATGGAGA TTTTCCGGGC TCGTATCATT TCCCAATAG
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Protein sequence | MSYQVFARKY RPLTFDDVLG QDHVVRTLKN AIEHNRLAHA YLFVGPRGTG KTSTARIFAK ALNCSGGPKV DFDPHEDICE EIAEGRSLDV LEIDGASNRG IDHIRDLRDN VRFAPSRGNF RIVYIDEVHM LTKESFNALL KTLEEPPPHV KFIFATTEPH KILPTILSRC QRFDLRPIPS EIIAEHLLHI ASAEGVSLSR EAAFAVAKVA DGGMRDAQSM LDQLVSFCGD HIEEQQVLHI FGITSRETVA HALALILNKE LPSLLHLLHE QAEAGRDMSQ FLSEIISAVR EILVSKVDPE ASFDSLPESS KEELAELVKR THTDKILRLV EVLAETEDKM RWSTNKRLHL EMGLIKAVHT LAEASISDII MALEGAPLAT AAPASSSDLA SQQEPSTFIS SATAPTPAPR QNIQSPVAAT NPTPATEEHL MDPIPDFSLS SPASSPAVQK IQSTDAQASP HPTQEAEPQQ ETLTPAAPPT SLAVAEEEFP YSATKLRTKT VPASEEITRH PDSDASDVSK FPTDSPEPTF MDPEENLPLE RRTNSFFDNL FDTPSTSSQT QAPVEKEEPA VLSQQSGRTI TEEDWKTVLE QMSAKFPLQA DFLANSVFSG YDGVAVAISF HPSDRQGMDS LGTGPLRTAL EAALSQYIGT SVTISIRQDF SIPEPVQEEL APLPAPPPSA STIPAPKPHT PQKKTAEPVQ EASKEENEDN SYYTDPLIDA AMEIFRARII SQ
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