| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1223 |
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| Symbol | |
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| ID | 6275591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1470687 |
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| End bp | 1471481 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642613279 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001877829 |
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| Protein GI | 187735717 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.665288 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.0822909 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGCGGCA TGAGCCAATC TTTTACGGAT AAACTTGCCG CCCGCATTAA AGAGACCGGT
TCCGCCTTGT GTGTCGGGTT GGATCCGCGC CCCGGCATGG ATGATTTGGA GGCGATTCCT
GCGCTGTTGC GGAAGGTTGT GGAGGAAACC GCTCCATATG CGGCAGCGTT TAAGCCGAAT
ATTGCCTATT TTGAAGCCAT GGGGTTGCGC GGTCTGGAAA TACTTGAGGA TTTGCTTCCG
GATATGCCTA AGGATGTTCC GGTGGTGCTG GATGCTAAGC GTGGAGATAT TGGAGAGACT
CAGAAGTATT ACGCTCATGC TTACTTTGAA CGCCTGGGTG TGGACGCTGT GACGTTGAGT
CCTTTTATGG GATATGATAC GCTGGAGCCT TTTCTGAATT ATGAAGGTAA AGGTGTTTAT
CTGCTGGCAG TTACTTCCAA TCCCGGTTCT GCGGATGTGG AACGGCAGGA ACTGGCAGGG
GGCCGCAGGG TTTTTGAACT GGTGGGAGAC ATGGTGCTCC GCTCTGTCCG GGAAGGCTGT
AAAACTTCCG TAGGCATGGT GGTTGGTTTG ACCAATGCAG ATTCCAGTAT TCTGGAGCGT
ATTCCGGATG CTCCTTTGCT CATTCCCGGC CTGGGTGCTC AAGGCGGTGA TCTTTCCTGC
CTGAGTGGTT CCGGTCACGT GGCGCCTCCC CTGATTAATG TCTCTCGAGG AATCATGTAC
CAGAATCCGG AATTGGGTTT TGCTGAGAAG GCCGCCGGAT TTGCTCAGCG CATTCGAGAG
GCATTGAATT ATTGA
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| Protein sequence | MGGMSQSFTD KLAARIKETG SALCVGLDPR PGMDDLEAIP ALLRKVVEET APYAAAFKPN
IAYFEAMGLR GLEILEDLLP DMPKDVPVVL DAKRGDIGET QKYYAHAYFE RLGVDAVTLS
PFMGYDTLEP FLNYEGKGVY LLAVTSNPGS ADVERQELAG GRRVFELVGD MVLRSVREGC
KTSVGMVVGL TNADSSILER IPDAPLLIPG LGAQGGDLSC LSGSGHVAPP LINVSRGIMY
QNPELGFAEK AAGFAQRIRE ALNY
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