Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1200 |
Symbol | |
ID | 6273843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 1436788 |
End bp | 1437831 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642613251 |
Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
Protein accession | YP_001877806 |
Protein GI | 187735694 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
TIGRFAM ID | [TIGR00123] cobalamin biosynthesis protein CbiM |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.028093 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCATATGG CGGACGGCTT CATCTCACCG GCGGTAGGCT GCACCATGTG GGCGGCTTCC GCTGCAATTA CAACGCTCTG CACACGTAAG GTCAGGCAGG AAAAAGAAAT GCGGCTCGTC CCGCTCATGG GCGTGCTGGG AGCCTTCATC TTTGCCTGCC AGATGCTGAA TTTCACCATT CCGGGCACCG GCTCCAGCGG CCATCTGGGC GGCGGCCTCA TCCTGGCGGT CCTTCTGGGG CCGTATGCGG GGTTCCTGGT CATGGCGGCC ATCCTGACGG TGCAGGCCCT TTTCTTTGCG GATGGGGGGC TGCTGGCCCT GGGCTGCAAT ATTTTCAATA TGGGGTTTTT CTCCTGCCTG GTAGCTTACC CTTTCATTTA CAGGCCCCTG GCCGGAACAA AAACCGGCAC GGGCCGCATC ACGCTGGCCA GCGTCATCGC CGCCGTCATC GGGCTCCAGA TGGGGGCTTT CTCCGTCGTT CTGGAAACAA CGGCCTCCGG CATCTCAGCC CTGCCCTTCG CCCAATTTGT TGAATTGATG CTGCCCATTC ATCTGGCCAT CGGCGCCGTA GAAGGCCTTG CTACGGCAGC CGTCGTCATC TTCATCAGCA AGGCACAGCC GTCCCTGCTG CGCCCGGCCG ACTTGGAAAC CGGAACCGTC AAAAAAGCAT CCTGGACCGT TTTGGGCATC TTTGCGGTAG CGGCCCTGCT CTGCGGAGCC GCCCTCTCCT GGTTCGCCTC CGCCTATCCT GACGGACTGG AATGGTCTGT AGCCGGAGTC ACCGGGTCGG AAGAAACCAG GCTGGCGGAA CCGTCCCCCC TCCACCGGAA CCTGGAAACC GTACAGGAGG CCACCGCCAT TATGCCGGAC TACGCCTTTC CCGCTGATGA CGGGGCAAAC ACCGCAGAAA CGGAAGCTTC CTCCTCCATT GTCAACCCTG AAACGAGCAT GGCCGGCGTG CTGGGAAGCG CCATTATTGC AGCCCTTATT TTTGCGGCCG GTTTCCTGTT CGGCAGAAAA CCGCACAGCC ACTGCCCCCG CTGA
|
Protein sequence | MHMADGFISP AVGCTMWAAS AAITTLCTRK VRQEKEMRLV PLMGVLGAFI FACQMLNFTI PGTGSSGHLG GGLILAVLLG PYAGFLVMAA ILTVQALFFA DGGLLALGCN IFNMGFFSCL VAYPFIYRPL AGTKTGTGRI TLASVIAAVI GLQMGAFSVV LETTASGISA LPFAQFVELM LPIHLAIGAV EGLATAAVVI FISKAQPSLL RPADLETGTV KKASWTVLGI FAVAALLCGA ALSWFASAYP DGLEWSVAGV TGSEETRLAE PSPLHRNLET VQEATAIMPD YAFPADDGAN TAETEASSSI VNPETSMAGV LGSAIIAALI FAAGFLFGRK PHSHCPR
|
| |