| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1111 |
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| Symbol | |
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| ID | 6273966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 1326464 |
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| End bp | 1328140 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613162 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_001877718 |
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| Protein GI | 187735606 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAGCG ATAGAGTTAA AGCAGGGTTC GAGCGTGCGC CGCACCGCAG TTTGATGCGT
GCCACCGGAA TGACGGATGA GGATTTAAGC CGTCCTTTCA TTGCCATTTG CAATTCTTTT
AATGAAGTGA TTCCGGGCCA TGTCCACCTG AACAGGGTGG CCGCCCTCAT CAAGGAGGAG
GTACGCAAGG CCGGAGGAAC TCCCGTGGAA TTCAACCTTC CCGGCGTTTG TGACGGCATT
GCCATGGGCC ACGGCGGCAT GAAGTTTTCC CTGGCCAGCC GTGAGCTGAT CGCGGACAGC
GTAGAGACGA TGCTGAGCGC CCATGCGTTT GATGCTATGA TCTGCATCCC TAATTGCGAC
AAGATTGTTC CCGGCATGAT TATGGGCGCC CTGCGCTGCA ATATTCCCAC TATTTTCTGC
AGCGGCGGTC CGATGGCCGC CGGCATGGCG GAGGACGGCA CGGTGCTGGA CCTGAACAGC
GTGTTTGAGG CTGTCGCCCG CTTTAAGGCA GGCAAGATTA ATGAGGAGGA ACTTCATTCC
CTGGAATGCC GCGCCTGCCC CGGCGCCGGT TCCTGCTCCG GCATGTTTAC AGCCAATTCC
ATGAATTGCC TGAGCGAGGT GATCGGCCTG GCCCTTCCCG GCAACGGTTC CCTGCTGGCT
ACTTCAGAGG AACGAAAGGA GTTCTGGAAG CAGACTGCCC GCCGCGCCGT GGAGATGGCG
AAGGCGGACG GCCCCCTGCC GCGAGACATC GTAACCCGTG ACGCTATCGA CAATGCTTTC
ACAATTGATA TGGCCATGGG CGGCAGTTCC AATACCGTGC TCCATACGCT GGCTATCGCC
AGGGAAGCCG GCGTGGAGTA TGACCTCCAG CGCATCAATG ATATTTCTAG GCGAACCCCG
AATATTTGCA AGGTGGCTCC TTCCTCCCGC TTCCACATGC AGGATGTTCT GCGTGCAGGC
GGGGTGAGTG CCATCATTCA TGAAATTGCC AGAATTCCCG GAGCCCTTCA TCTGGACGCC
ATGACCGTCA GCGGGAAAAC GCTGGGTGAA ACAGTGGAGG GATGCGGCAT TGCGGATGAA
ACCGTGATTC ATCCGTTGGA AAATGCCTAT TCCCGTGATG GCGGCCTGGC GATTCTGTTC
GGCAATCTGG CTGAGGAGGG CGCTGTGGTG AAAAAGGCGG GTGTGCATCC GAATATGATG
AGTTTCCGCG GGCCCGCCGT GATTTTCGAG TCTCAGGAAG AGGCCTGCGA AGGCATCCTT
GCCGGGAAGG TGAAATCAGG CGATGTGGTT GTCATACGCA ATGAAGGCCC CAAGGGCGGC
CCCGGCATGC AGGAAATGCT GGCTCCCACT TCCTATATTA TGGGGCAGGG CCTTGGCGCG
GAAGTGGCGC TTATTACGGA CGGCCGTTTT TCCGGAGCCA CGCACGGAGC CTGTATTGGC
CATATTTCCC CGGAAGCGGC GGAAGGCGGC CTGATCGGCC TGCTGAGGAA CGGGGATATT
ATTGAGTATT CCATTCCGGA CCGCACGCTG AACGTCTGTT TGAGCGAGGA GGAGATCGCA
CGCCGCCGTG CGGATTGGAA ACCTACCTAT AACAGGGTTT CCTCCTCCTG GCTGAGCCGT
TACCGCCAGC TTGCCACGAA TGCCAGCAAG GGGGCAGTCC TCCGGCGCGG GGAATAA
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| Protein sequence | MRSDRVKAGF ERAPHRSLMR ATGMTDEDLS RPFIAICNSF NEVIPGHVHL NRVAALIKEE
VRKAGGTPVE FNLPGVCDGI AMGHGGMKFS LASRELIADS VETMLSAHAF DAMICIPNCD
KIVPGMIMGA LRCNIPTIFC SGGPMAAGMA EDGTVLDLNS VFEAVARFKA GKINEEELHS
LECRACPGAG SCSGMFTANS MNCLSEVIGL ALPGNGSLLA TSEERKEFWK QTARRAVEMA
KADGPLPRDI VTRDAIDNAF TIDMAMGGSS NTVLHTLAIA REAGVEYDLQ RINDISRRTP
NICKVAPSSR FHMQDVLRAG GVSAIIHEIA RIPGALHLDA MTVSGKTLGE TVEGCGIADE
TVIHPLENAY SRDGGLAILF GNLAEEGAVV KKAGVHPNMM SFRGPAVIFE SQEEACEGIL
AGKVKSGDVV VIRNEGPKGG PGMQEMLAPT SYIMGQGLGA EVALITDGRF SGATHGACIG
HISPEAAEGG LIGLLRNGDI IEYSIPDRTL NVCLSEEEIA RRRADWKPTY NRVSSSWLSR
YRQLATNASK GAVLRRGE
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