| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1051 |
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| Symbol | |
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| ID | 6274059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 1254017 |
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| End bp | 1254673 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642613102 |
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| Product | Endopeptidase Clp |
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| Protein accession | YP_001877658 |
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| Protein GI | 187735546 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0321666 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTCAAG ACCAATCTTC CAAATCAACC CCCGCAAACT CCTATTATGT GCCCATGGTG
GTGGAGCAGG ACGGCCGCGG CGAACGAGCC TTTGACATTT ACTCCCGTCT CCTGAAAGAC
CGCGTTATCT TCATCGGCTC CGCTATTGAC GACGATGTGG CGAATTCCGT CATTGCCCAG
CTTCTGTTCC TTCAGATGGC TGACCCGAAA AAAGACATCC ACGTCTACAT CAACTCCCCC
GGAGGATCCG TCACGGCGGG TCTCGCAATT TACGATACGA TGCAATTCGT CTCTTGTGAC
GTAAATACAT ATTGCCTGGG CATAGCGGCC TCCATGGGTT CCGTCCTTCT GGCTGCGGGA
ACTCCCGGCA AACGCTTCTG CCTGCCGAAC TCCCACGTAA TGATTCACCA GGTTTCCGGA
GGTGCCCAGG GAACCGCTTC AGATGTGGAA CGCACCATCG GCTTCATGTT CAACCTCAAA
AAACGCCTCA ACGGCATTCT GGCCAAACAT ACCGGTAAAA CGGAAAAGCA AATTGAAAAG
GATGCTGACC GCGACAACTA CATGACTGCC GAGGAAGCCG TGGCCTACGG CCTGGTGGAT
AAAGTTCTGG CGCATCACTC TGATGACCAG GGCGACAAGA AAAAAACCAA GGCCTGA
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| Protein sequence | MFQDQSSKST PANSYYVPMV VEQDGRGERA FDIYSRLLKD RVIFIGSAID DDVANSVIAQ
LLFLQMADPK KDIHVYINSP GGSVTAGLAI YDTMQFVSCD VNTYCLGIAA SMGSVLLAAG
TPGKRFCLPN SHVMIHQVSG GAQGTASDVE RTIGFMFNLK KRLNGILAKH TGKTEKQIEK
DADRDNYMTA EEAVAYGLVD KVLAHHSDDQ GDKKKTKA
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