| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1036 |
|---|
| Symbol | |
|---|
| ID | 6274077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 1229683 |
|---|
| End bp | 1231482 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642613085 |
|---|
| Product | GTP-binding protein LepA |
|---|
| Protein accession | YP_001877643 |
|---|
| Protein GI | 187735531 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0481] Membrane GTPase LepA |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 71 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATTG AACTGACTCG CAATTTCTCC ATTATCGCTC ACATCGACCA CGGAAAGACC
ACCCTTTCCG ACCGGCTGCT GGAAAAGACG AATACCATTT CCGAACGGGA GAAGCAGGAT
CAGCTTCTGG ACGCCATGGA CCTGGAGCGG GAAAAGGGCA TCACCATCAA GTCCCACCCC
GTTACCATTT TCTACAAGGC CGGGGACGGA AAGACTTACA AGCTCAATCT GCTGGATACG
CCGGGCCATG TGGATTTCTC CTATGAAGTG TCCCGTTCCC TGGCGGCATG CGAAGGAGCC
CTCCTTATTG TGGACGCAGC CCAGGGAGTG GAAGCCCAGA CACTTGCCAA CATGCACCTG
GCCATGGATC TGAACCTGGC CATTATCCCC GTCATCAATA AGATTGACCT TCCCAGCGCC
AACCTGCCCA AAGTGTACCG CCAGCTGGAG GACATCGTCT GCATCCCCCA TGAGGAAGCC
ATCCATGCCT CCGCCAAGAT GGGCATCGGC ATTGACGATA TTCTGGAAGC CGTTGTTCAG
CGCATCCCTC CGCCTGAAAC GGAACAGGAC GGCCTTCTGC GCGCCCTGGT GTTCGATTCC
GTTTACGACG CCTACCGCGG TGTAGTCTCC TATGTGCGCG TCATTTCCGG CAGCGTGCAC
CGCGGCATGA AAGTCAAACT TTTCGCAACG GACGAAGTGT ATGAAGTGAA GGAAGTGGGT
ATCTTCACTC CCAAAATGAC CCGAACGGAT TCCCTGGAAG CCGGTGACGT AGGCTACATC
ATCGCCAACA TGAAATCCGC GGCTGATGTC AAGATCGGGG ACACGTATAC GGATTACATG
CGCCCCTGCC CATCCCCCCT GCCCGGTTTC AAGGAAATCC GCCCCATGGT CTTTTCCGGC
ATTTATCCGG TGGATTCCTC CGATTTTGAA GCCCTGAAAG CGGCCATGGC GAAGCTTCAG
ATTAATGACG CCGCTTTCTC CTTCCAGGCG GAATCTTCCG TAGCTCTGGG CTTCGGGTTC
CGTTGCGGCT TCCTTGGCCT GCTCCATATG GAAATTATCC AAGAGCGTCT GCGCCGGGAA
TTCAACATGG ATATCATCTC CACCTACCCC TCCGTGATTT ATGAGGTCAC CAAGACCAAT
GGAGAGGAAA TCAATGTGGA TAATCCCAGC CTGCTCCCGG AACCGCAGGA AATTCAGGAA
ATCCGGGAAC CTATCGTCAA GGTGTTCATT ATGCTTCCTG GGGAATACAT CGGGGATATC
ATGCAACTTG TCCTGGAAAA ACGCGGCAGC GTGGACAATA CGGAGACCAT TGACGACATG
CGCGTAATGC TCACCTGCAC CGTCCCTCTG GCGGAAATTC TGGTGGATTT CAACGACAAG
CTCAAATCCA TGACGCGCGG CTACGGCTCC ATGGATTATG AATACGCCGG CTACCAGGCC
GCCAAGCTCA TTAAAATGGA CATGCTCATC GCCGGGGAAC CGGTGGATGC TTTCTCCATG
ATCGTTCACC AGGACAAGGC AGCCTCCCGC GGCAGGGAAC TGGCGGAACG CCTGAAAAAC
GTCATTCCCC GCCAGCTCTT CACCGTCGCC ATTCAGGCCT GCATTGGCGG AAAGATCATT
GCCCGGGAAA GCATCTCCCC CATGCGCAAG GACGTGACGG CCAAATGCTA CGGCGGGGAC
GTCACCCGCA AGCGCAAACT TCTGGAAAAG CAGAAGGAGG GCAAAAAGCG CATGAAGGCC
ATCGGAAAAA TCAACATTCC GCAGGAAGCG TTCATCAAGG TGCTGAAAAC GGGGGATTAA
|
|---|
| Protein sequence | MSIELTRNFS IIAHIDHGKT TLSDRLLEKT NTISEREKQD QLLDAMDLER EKGITIKSHP
VTIFYKAGDG KTYKLNLLDT PGHVDFSYEV SRSLAACEGA LLIVDAAQGV EAQTLANMHL
AMDLNLAIIP VINKIDLPSA NLPKVYRQLE DIVCIPHEEA IHASAKMGIG IDDILEAVVQ
RIPPPETEQD GLLRALVFDS VYDAYRGVVS YVRVISGSVH RGMKVKLFAT DEVYEVKEVG
IFTPKMTRTD SLEAGDVGYI IANMKSAADV KIGDTYTDYM RPCPSPLPGF KEIRPMVFSG
IYPVDSSDFE ALKAAMAKLQ INDAAFSFQA ESSVALGFGF RCGFLGLLHM EIIQERLRRE
FNMDIISTYP SVIYEVTKTN GEEINVDNPS LLPEPQEIQE IREPIVKVFI MLPGEYIGDI
MQLVLEKRGS VDNTETIDDM RVMLTCTVPL AEILVDFNDK LKSMTRGYGS MDYEYAGYQA
AKLIKMDMLI AGEPVDAFSM IVHQDKAASR GRELAERLKN VIPRQLFTVA IQACIGGKII
ARESISPMRK DVTAKCYGGD VTRKRKLLEK QKEGKKRMKA IGKINIPQEA FIKVLKTGD
|
|---|
| |