Gene Amuc_1029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1029 
Symbol 
ID6274088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1221833 
End bp1222747 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content55% 
IMG OID642613078 
Productprotein of unknown function DUF6 transmembrane 
Protein accessionYP_001877636 
Protein GI187735524 
COG category[G] Carbohydrate transport and metabolism
[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC GACAGCGCAC CCTGGGCCAT GCCGCCGCCC TCATGACCAT TATCATCTGG 
GGAACCACTT TCGTCTCCAC CAAGGTGCTC TTGCGGGATT TCACCCCCGT CACGGTTCTC
TTTACCCGCT TTGTGATCGG ATATGCCTTC CTCTGGTGCC TGAAACCGCG GGTTCTTCCA
TTCTCCGGCT GGAAAAAGGA GCTTCTGTTC GCCGGAGCGG GATTGACCGG GGTTACCCTG
TACTTCCTGC TGGAAAACAT CGCCCTGACC TATACCTTCG CCTCCAATGT GGGCATTATC
GTAGCCGTGG TTCCTTTCTT CACAGCCCTT CTGGCCCATT TCCTGCTGAA GGGGGAAGGC
TTTTCACGCC GTTTCTTCCT GGGTTTTTCC GCTGCCTTTA CAGGTATCTT CCTTATCATG
GCAAACGGAG CCTTCGTTCT GGAACTGAAT CCGGCGGGGG ATATCCTGGC ACTGGGCGCG
GCCTTCGTCT GGGCGGCGTA TTCCATCCTG ATGAAAAAAA TCGGCGTCAA CACATCCAAC
ATGATCATCT GCACGCGCCG CATTTTCTTC TATGGCATTG CACTGATGAT TCCCGCCCTG
TGGGTCCTTC CTGCAAACAT GGACTGGCGC CTGATGGCAA AACCCGTCAA TGCCATCAAT
CTGCTGTATC TGGGTCTGTT CGCCTCCGCA CTGTGCTTTC TGACCTGGAA CCGCGTGGTG
GAAATTCTGG GAGCCGTCAA ATCCAGCGTT TACATTTACA TGATACCGGT CGTAACCGTG
GTGGCCTCAG CCATCATTCT GGGGGAACGC CTGACCTGGA TATCCCTGGC GGGGATTCTG
CTTACCCTGT GCGGCGTCAC GATTTCAGAG TACAGAAAAA AAACACGGAA AAGCGGGAAG
AAAAGGCTAT CCTGA
 
Protein sequence
MSSRQRTLGH AAALMTIIIW GTTFVSTKVL LRDFTPVTVL FTRFVIGYAF LWCLKPRVLP 
FSGWKKELLF AGAGLTGVTL YFLLENIALT YTFASNVGII VAVVPFFTAL LAHFLLKGEG
FSRRFFLGFS AAFTGIFLIM ANGAFVLELN PAGDILALGA AFVWAAYSIL MKKIGVNTSN
MIICTRRIFF YGIALMIPAL WVLPANMDWR LMAKPVNAIN LLYLGLFASA LCFLTWNRVV
EILGAVKSSV YIYMIPVVTV VASAIILGER LTWISLAGIL LTLCGVTISE YRKKTRKSGK
KRLS