Gene Amuc_1026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1026 
Symbol 
ID6274091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1218179 
End bp1218682 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content57% 
IMG OID642613075 
ProductPeptidylprolyl isomerase 
Protein accessionYP_001877633 
Protein GI187735521 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACTG ACAAAAATAT CACCATCCAT ACTTCCAAGG GCGACATCAA GCTGACGGTG 
TTTGCTTCCA AGACGCCCGT GACGGCGGCT TCCTTTCTGA ATCTGGCGTC CAGGGGATTT
TATGACGGGC TCAAATTTCA CCGTGTGATC CCGGATTTCA TGATTCAGGG CGGCGATCCC
ACCGGCACGG GCATGGGGGG GCCCGGCTAC AGGTTTGAAG ACGAGTGCCG CCCGGACCTC
AGGCATGACG GCCCCGGCGT GCTTTCCATG GCAAACGCGG GCCCCGGCAC CAACGGTTCC
CAATTCTTCA TCACCCATGT GCCCACCGAC TGGCTGAATG GCAAACACAC CGTCTTCGGC
AAGGTGACGG AAGGTCAGAG CGTGGTGGAT TCCATTAAGC AGGGAGATAC CATCTCCGGC
ATTACGATTG AAGATAATGC GGACGATCTG TTTACGGAAC AGGCCGACCG CATTGCCGCG
TGGAACAAGG CACTTGGTAA GTAA
 
Protein sequence
MATDKNITIH TSKGDIKLTV FASKTPVTAA SFLNLASRGF YDGLKFHRVI PDFMIQGGDP 
TGTGMGGPGY RFEDECRPDL RHDGPGVLSM ANAGPGTNGS QFFITHVPTD WLNGKHTVFG
KVTEGQSVVD SIKQGDTISG ITIEDNADDL FTEQADRIAA WNKALGK