Gene Amuc_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0903 
Symbol 
ID6274264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp1076612 
End bp1077277 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content57% 
IMG OID642612957 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_001877516 
Protein GI187735404 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG5632] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATATA GATTTGTCTG GACGGGCTTT TTTGCCGTAT TCGCCGCCCT GACGTTCTGC 
AGCTGTTCGC AGAACGACAA AATGAGGCCG CCGGCCGTCT CCTTTAAAAT TCAAAAGGCG
CCGGTAGTTC CCCGCACACC CGGCCAGATG GGCCGTGAAG TAGGCATTAA AGTTTCCTAC
ATGCCCAAAA ACACGTATGC CCGCAAGCGC GCATCCTCCA TGCGCCCCCG CTTCATCACC
ATCCACAGCA CCGCCAACCC CAAAGGAGAC GCCAATGCCC ACTCCCGTTA CCTGAACAGC
GGCAAGTCCC GCAGCCTGAA CTGGCACTTC ACTGTGGACC AATTCGGCGC CTACCAGCAC
ATCCCCACTA CGGAAACCGG CCACCATGCG GACCATTCCG GACCGGGAGA CCAATACTCC
GTAGCCATTG AAATGTGTGA ATGCACCACG CATAACCCTG TCGTCATCTA CAACAAGACG
GCCAAGCTGG CGGCGCTGCT GATGATGCGC TACAACGTCC CCCTGCGCAA CGTAGTGCCT
CACAACTACT GGTCCGGCAA GAATTGCCCC GCCCCGCTGA TGACTAATGG GCGCCCCGGG
TACAAATGGA GCTGGTTCAT TTCCCGCGTG GATTATTACT ACCGCTGCCT CCAGGCAGGA
AGATAA
 
Protein sequence
MEYRFVWTGF FAVFAALTFC SCSQNDKMRP PAVSFKIQKA PVVPRTPGQM GREVGIKVSY 
MPKNTYARKR ASSMRPRFIT IHSTANPKGD ANAHSRYLNS GKSRSLNWHF TVDQFGAYQH
IPTTETGHHA DHSGPGDQYS VAIEMCECTT HNPVVIYNKT AKLAALLMMR YNVPLRNVVP
HNYWSGKNCP APLMTNGRPG YKWSWFISRV DYYYRCLQAG R