Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0898 |
Symbol | |
ID | 6274269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 1070694 |
End bp | 1073303 |
Gene Length | 2610 bp |
Protein Length | 869 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 642612953 |
Product | DNA topoisomerase III |
Protein accession | YP_001877512 |
Protein GI | 187735400 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0550] Topoisomerase IA |
TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 69 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAAA CGTTAATTAT AGCAGAAAAG CCGAGCGTCG CCACTGATTT GGCGAGAGTG CTCGGCAAAG AGCTTGGAAA ATTCACCCGG GACAAGTCCG GGGCATTTTA CCAGAATGAC CGGGCCATCA TCACCTCTGC CGTAGGCCAT CTGCTGGAAC AGAAAAAACC CATGACGGAA GAAGGAAAGT CCCTGCCGTG GAAATTCGAC TATCTGCCCG TCATCCCCAG GAAGTTTGAA CTGGAACCCA TCAAGCAGTC GGAAGACCGT TTGAAAAAGG TTCTTCAGCT TGCCAGGAGC AAGGACGTCA CGGAAATCGT CAACGCATGC GATGCCGGGC GTGAAGGGGA ACTGATCTTT CACAATCTGG CGCGTTACGG AAAATGGACC AAGCCTACGC GGCGCTTATG GATGCAGTCC ATGACAGATG AGGCCATCCT CAACGCATGG CATGGCATGC GCAGCGAAGC TGACATGAAG CCCCTGACGA ATGCCGCCGT GTGCCGTTCC GAATCAGACT GGCTGGTGGG GCTGAACAGC ACCCGCGCCT TGACGATCCT GCAATCCCGC GGCGGCTTCA ACGTCACCCC CGCCGGGCGC GTGCAGACGC CCACGCTGGC TATTCTGACG CAGAGGGAAT TGGAAATCCA GGCGTTTGAA CCGGAGCCCT ATTCGGAAGT ATGGGCCGAA TTCGACGTTC AGTCCGGCTC TTACTCCGGC CGCTGGATTG ACCGTGACTG GAAGAAAAAC GATCATCCCC ACTCCCGCGC GGAGCGCATC TGGGATCCGG AACAGGCGGC CGTCATCCGC GACCGCTGCC GCGGCAAAGC CGGCACGGTG ACGGAAGAAA AGAAACCGGT CACGACGGTC GCCCCGCTGT TGTATGACCT GACTTCCCTT CAGCGGGAAG CCGCCAACCG CTACGGTTTT TCCGCCAAGC GCACGCTGCA GCTGGCCCAG GAATGCTATG AAAAGCACAA GGTGCTCACT TATCCGCGTA CGGACTCCCG CTACCTGCCG GAAGATTATC TGGGCAAGGT TTACGGCATC GTAGGCACGG TGGCGGAGCA GAACCCGGAA TTCGCCCCCT TTGCCAGGGA CATTCTGGAC AACAAGCGCA TCAAGCCCAA CCGGCGCGTG TTTGATACAA AAAAGGTGAG CGACCACTTT GCCATCATCC CGACCGGGAA GATGGAGAAG CTTACCGGGG ACGCGCAGAA ACTCTTTGAA ATGGTCATGG CCCGTTTCCT GGCCGTCTTC TTCCCCGCTG CCGTGTTTGA AGACACGCGG AGAACCACGC TCATTACCCA CCAGGACGGC GTGACGGACG CTTTCCTGAC CACGGGCCGG GTGCTTGTGG AGCCGGGCTG GCAGGCCGTT TACGGACGGA AGGCCGGCAC TTCCTCCAAG GAGGAGCTGG TGCCCGTCCG CGACGGGGAG CAGGCCGCCT TGCGTGAGAT TGAAATCCGC AACGCCATGA CCAAGCCGCC CGCCCGGTAC AACGAAGCCA CGCTGCTGGC TGCCATGGAG GGGGCAGGAA AACTGGTGCA TGACGAAGAA CTGGCCGCCG CCATGAGCGA ACGCGGCCTG GGCACTCCCG CCACCCGCGC CTCCATCATT GAAGGGCTGA TTTCCCAGGA ATACATCGTC CGGGACGGCC GCGAACTTCT GGCGACGCGC CGCGGGATTG AACTGATTGC CCTGCTGGAA CGCATCGGCC TGAAAACGCT CACCTCCCCC AGCCTGACTG GGGAATGGGA ATACAAGCTC AAGCAGATGG AACAGGCCGC CCTGCCGAGG GATTCCTTCA TGGAGGGCAT TAAGACCCTG ACCGGGGAAA TCGTGAAGAG GGTGAAGGAT TTCCGGGAAG CCCAGCAGCA GGTGGAACTG CCGGAAATGG AATTGGACTG CCCTTCCTGC CATGCCCACG GCCTGAAAAA CACGCTGGAC GCCGTTTCCT GCCGTTCCTG CAAGTTCAGC ATCCGCAAAG TTATCTCCGG CCGCGACATG GCGGATGAAG AATTGAAGAC CCTTATTGTG GACGGCAGGA CGGGAATTCT CCACGGATTT ACCTCCCGGT TCGGCAAGCC CTTTGAGGCG GGGCTGGAAC TCAACGACAA ATTCCGGGCC ACGCTTTACT TCCCGGCGCG GGAGGAAGAT GAAGCCGCAG GGGTGGAGGA AGCCGTGAAA GTGGCTTCCG TCGCCATTCC GGACATGGGA GAGCATGATG TGATGGAAAC GGCCAAGGCC TGGAAAATTC CTTCCCTGAC CCTTGGAAAG GAACATGCCG CCGTCTCCGT TTCCCGGACT ATCCTGGGAC GTGAAATCCC GCTGGACCAG GTATTGAAGA TTTTGGCGGA AGGAAAATCC GATCTGATGA AGGGGTTCAT TTCGCAGCGT ACCAAGCGTC CGTTTGACGC TTATCTGGTC TTCAATGCAA AGACGGGGAA AATAGGTTTT GAATTCCCGC CGCGGGAAAG GAAATATCCC GCTAAAAACG CTGCCGGAAA AACGGAAGGC AAGGCGGAGA AGACGGGCCG GAACGCCGCC AAAACTGCCG GGAAAGACTC CAAATCCGGG GGGGCTGCCA AAAAGGGGCG CAAGCAATAA
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Protein sequence | MSKTLIIAEK PSVATDLARV LGKELGKFTR DKSGAFYQND RAIITSAVGH LLEQKKPMTE EGKSLPWKFD YLPVIPRKFE LEPIKQSEDR LKKVLQLARS KDVTEIVNAC DAGREGELIF HNLARYGKWT KPTRRLWMQS MTDEAILNAW HGMRSEADMK PLTNAAVCRS ESDWLVGLNS TRALTILQSR GGFNVTPAGR VQTPTLAILT QRELEIQAFE PEPYSEVWAE FDVQSGSYSG RWIDRDWKKN DHPHSRAERI WDPEQAAVIR DRCRGKAGTV TEEKKPVTTV APLLYDLTSL QREAANRYGF SAKRTLQLAQ ECYEKHKVLT YPRTDSRYLP EDYLGKVYGI VGTVAEQNPE FAPFARDILD NKRIKPNRRV FDTKKVSDHF AIIPTGKMEK LTGDAQKLFE MVMARFLAVF FPAAVFEDTR RTTLITHQDG VTDAFLTTGR VLVEPGWQAV YGRKAGTSSK EELVPVRDGE QAALREIEIR NAMTKPPARY NEATLLAAME GAGKLVHDEE LAAAMSERGL GTPATRASII EGLISQEYIV RDGRELLATR RGIELIALLE RIGLKTLTSP SLTGEWEYKL KQMEQAALPR DSFMEGIKTL TGEIVKRVKD FREAQQQVEL PEMELDCPSC HAHGLKNTLD AVSCRSCKFS IRKVISGRDM ADEELKTLIV DGRTGILHGF TSRFGKPFEA GLELNDKFRA TLYFPAREED EAAGVEEAVK VASVAIPDMG EHDVMETAKA WKIPSLTLGK EHAAVSVSRT ILGREIPLDQ VLKILAEGKS DLMKGFISQR TKRPFDAYLV FNAKTGKIGF EFPPRERKYP AKNAAGKTEG KAEKTGRNAA KTAGKDSKSG GAAKKGRKQ
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