| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0828 |
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| Symbol | |
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| ID | 6274349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 978169 |
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| End bp | 978867 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642612878 |
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| Product | two component transcriptional regulator, winged helix family |
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| Protein accession | YP_001877442 |
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| Protein GI | 187735330 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.159677 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACT TTCCTGCAGA TATCCTGATT ATTGACGATG AACGGCAGAT ACGCCGTCTT
CTGAACCTGA CGCTGACCGG CGCAGGCTAC CATGTCCGCG AGTGTGAAAA CGGGCAGCTT
GGCTTGAGTG AGACCGCTCT GAAGCGGCCG GATGCCATTA TTCTGGATCT GGGGCTTCCG
GACATTAACG GCTTGGAAGT GCTGAAACAG CTTCGGGAGT GGACTCAGGT TCCTATCCTG
ATTCTAACGG CTTGGGACAG GGAGGATGAA AAGGTGGATG CCTTGGATGC CGGGGCGGAT
GATTACTTGA CCAAGCCGTT CAGCGGCCGT GAATTGCTGG CGCGCCTGCG CGTGATGCTT
CGGCGCAATC GTCCGGACCG TGAGCCGTCC GTATTCCGGC TGGGTCCCAT TGTCGTGGAT
CTGAGTTCCC GGCGCGTGGA GAAGGGGAAA GAGGAAATTC ATTTAACCTC CAAAGAGTAC
GGAATTCTGC GCCTGCTTCT GCTCCATCAG GGCAAGGTGA TGACCCACCG CCAGCTGCTC
CGTGAAATTT GGGGTCCCCA GCATGAGGAG GACACGCACT ACCTGCGGGT GCACATTGCC
CACCTGCGCC AAAAGCTGGG GGATTCCGAT CCGGAAAACC GCATTATTCG CGCGGAATCC
GGCCTGGGTT ACAGAATTGT GGCGGATGGA GCCGAGTAG
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| Protein sequence | MSNFPADILI IDDERQIRRL LNLTLTGAGY HVRECENGQL GLSETALKRP DAIILDLGLP
DINGLEVLKQ LREWTQVPIL ILTAWDREDE KVDALDAGAD DYLTKPFSGR ELLARLRVML
RRNRPDREPS VFRLGPIVVD LSSRRVEKGK EEIHLTSKEY GILRLLLLHQ GKVMTHRQLL
REIWGPQHEE DTHYLRVHIA HLRQKLGDSD PENRIIRAES GLGYRIVADG AE
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