| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0819 |
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| Symbol | |
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| ID | 6274358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 964236 |
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| End bp | 965615 |
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| Gene Length | 1380 bp |
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| Protein Length | 459 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 642612869 |
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| Product | multi antimicrobial extrusion protein MatE |
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| Protein accession | YP_001877433 |
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| Protein GI | 187735321 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.10085 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAGAA ATGCAATTGA TTTAGGCACA CTGGACGTAT GCACATTATT CAGAAAGTAT
TTTATCCCGA CCTTATTCGG GATGCTTAGC ATATCGGCAG TAACGGCAGT AGACGGAATA
CTCGTCGGTC ACGGAATCGG AAGCGATGGC ATTGCCGCTA TCAATATATG CATTCCCCTG
CTGATGTTGT TTACCGGGAT AGGGCTCATG GCAGGCGTAG GCTCATCCGT AGTCGCTTCC
ATTCAGCTAT CAAAAGGAAA ACTGGAAGCC GCGCGCCTTA ATGTCACCCA GGCCTTGTTG
TTCGTCACCA TTGCCGCCAT CGTGCCATCT GCCTTGATGA TGGCATATCC GTCAGCTACA
GCCCGATTTT TAGGCGCTTC CGAACATCTT ACCCCCATGG TTAGGGAATA CCTGTTGTGG
TTCATCCCCT CGTTGATATT CCAGATGTGG TGCTCTGTCT GCCTATTCAT GATTCGTTTG
GATGGCGCTC CGAAGTTGGC TATGATGTGC AATATCATTG CTGCAATCAT CACCGTAATA
CTCGGTTGGC TGTTTATCTT TCCATTGGGC TGGGGATTGA CGGGAGCTGC TTTCGCCGCA
ACCATAGCAC TGTTTGCGAG CGGCGCCACG GGCCTTATTT ATTTATGGAT ATTTGCACAT
AAACTGCGGC TTTATCCTAT TAAATGGAGC ATCAGAAGTT TTCGGTTCTC CCTCCTTAAT
ATTGTCTGCC AATGTCGCAT CGGTTCTTCC GCTTTGCTGA CTGAAGCGAC ACTGGCCACG
CTCATGTTCG TCGGGAACCA CACATTGATG AAATATCTGG GAGATAATGG AGTAGGAGCG
TTCGGCATTG CCTGCTATTA CCTTCCGTTC GTATTCATGG TAGGCAATGC CATAGCGCAA
TCAGCGCAAC CCATCATCAG CTATAACTTC GGGCTTGGAG AGAAAAAACG CGTAGCCGAT
ACAAAACGGA TCGCATTATT TACCTCCGTT GTTTGCGGCA TAGTCACGAC GGCAGCATTC
ATTTTGTTCC CGCATATTCT GGTAGGCTTG TTCGTCAATC CGGACAGCAC TGCGGCGCTC
ATAGCCATTG AGGGATTTCC ATATTTCTCC CTGGCATTTG TTTTCTTCAT CATCAACCTG
ATGCTCATCG GTTATTACCA AAGCGTGGAA AATGTAAAAC TCGCCAATTT GTTTGCCCTG
TTGCGAGGAT TTGTTTTTCT TATTCCATGC TTTATCCTGT TGCCTGAAGC AATGGGAACG
AACGGTGCGT GGCTAGCACT TTGTCTGTCG GAAATGTTGA CCATATTAAC AGTTGCTGTC
CTATTTATTC TACGCAAAAA GAAAACACTT CTTCATCAAA CAGGTGAAGA ATGCAGTTAA
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| Protein sequence | MKRNAIDLGT LDVCTLFRKY FIPTLFGMLS ISAVTAVDGI LVGHGIGSDG IAAINICIPL
LMLFTGIGLM AGVGSSVVAS IQLSKGKLEA ARLNVTQALL FVTIAAIVPS ALMMAYPSAT
ARFLGASEHL TPMVREYLLW FIPSLIFQMW CSVCLFMIRL DGAPKLAMMC NIIAAIITVI
LGWLFIFPLG WGLTGAAFAA TIALFASGAT GLIYLWIFAH KLRLYPIKWS IRSFRFSLLN
IVCQCRIGSS ALLTEATLAT LMFVGNHTLM KYLGDNGVGA FGIACYYLPF VFMVGNAIAQ
SAQPIISYNF GLGEKKRVAD TKRIALFTSV VCGIVTTAAF ILFPHILVGL FVNPDSTAAL
IAIEGFPYFS LAFVFFIINL MLIGYYQSVE NVKLANLFAL LRGFVFLIPC FILLPEAMGT
NGAWLALCLS EMLTILTVAV LFILRKKKTL LHQTGEECS
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