Gene Amuc_0796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0796 
Symbol 
ID6274382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp933558 
End bp934202 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content55% 
IMG OID642612847 
Productprotein of unknown function DUF205 
Protein accessionYP_001877411 
Protein GI187735299 
COG category[S] Function unknown 
COG ID[COG0344] Predicted membrane protein 
TIGRFAM ID[TIGR00023] acyl-phosphate glycerol 3-phosphate acyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.348496 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones65 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCCT GGATAGTTTT CTATTACCTG ATCGGAGCGA TTCCGTTCGG CTACCTTGCC 
GGCAGAATCA GAGGGATTGA CCTGAGGCAG CAGGGTTCCC GCAACATAGG CGCTACCAAT
GCGTGGCGCG TACTGGGCTG GAAGTGGGGC CTTTCCGTTT TCATTCTGGA CTTCTTAAAG
GGGTTCATCC CTGTGTTCGG CGCCTTGAAC TGGCTGCCGT TCCTGACGGG GGATGCGGGC
GGCTGGGATT TCAATGTCTT GGTAGTTCTC TCCTGTTTCG CTGTTATACT CGGTCATACT
TACACCTGTT TCCTGGGATT CAGGGGAGGA AAAGGCGTAG CGACAACCGC GGGGGTTTTA
TTTGCCCTCA ATCCGGTGGT GGCTTGCGTA GCTCTGGCTT CTTGGCTGGT GGTTATGGGA
ATCTCCGGCA TCGTGTCCCT GGCCAGCCTG GTGGCCGCTG TGGTGATGAT CGCCGCCGGA
TGGTGGATTT ATCCGCTTTG CCAGGACGGG GATGTCTCCC CCCAGATACT TTACGTCGCC
TTTTTCACGG TGGTAGGCGC ACTGGTGATT CTCAAGCACC GTTCCAATAT CGCAAGGCTT
CTCAACGGAA CGGAGCACTC CTTCTATTCC AAAAAGTCCA AGTAA
 
Protein sequence
MIAWIVFYYL IGAIPFGYLA GRIRGIDLRQ QGSRNIGATN AWRVLGWKWG LSVFILDFLK 
GFIPVFGALN WLPFLTGDAG GWDFNVLVVL SCFAVILGHT YTCFLGFRGG KGVATTAGVL
FALNPVVACV ALASWLVVMG ISGIVSLASL VAAVVMIAAG WWIYPLCQDG DVSPQILYVA
FFTVVGALVI LKHRSNIARL LNGTEHSFYS KKSK