Gene Amuc_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0792 
Symbol 
ID6274388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp929962 
End bp931023 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content58% 
IMG OID642612843 
ProductRadical SAM domain protein 
Protein accessionYP_001877407 
Protein GI187735295 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones68 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCCGG TTTTTAGTGA AACAGATCTC AATGAACGCC CTTTCCTGGT CTTCTGGGAA 
GTGACGCGCG CTTGCGCGCT TGCGTGCAGA CATTGCCGCG CCGTCGCCCA GCCGCGTCCC
CACCCGGATG AATTGACTCA TGAGGAGGCA TTGCGCCTGA TTGACCAGTT GGCGGAACTG
CGGCCTCCCA TGCTGGTGTT GACAGGCGGA GACCCGGTCA TGAGGCCGGA TATTCTGGAA
TTGGTCCGTG CGGCTTCCGG CAAGGGGCTG CATGTAGCAT TGAGCCCTGC TGCTACCGCC
CGGCTGTTGC ACACGGATTT CCATGCGTTG AAAGAAGCTG GGGTTCAGAG CATGTCATTG
AGCCTGGACG GTGCGCATGA AAGTACCCAT GACGCCTTCC GCGGTGTCCC CCACACATAT
GAACGGACTC TCCGGGCTGC GGAAATGGCG AAGGAAGCCG GCATGCACTT GCAAATCAAC
ACCACCATTA CCAGGAGCAC GCTGGGAGAA TTTGACGACT TTGTGGAGCT GGTGAAAAAA
ATGAAACCGG GCATGTGGAG CGTGTTTCTT CTGGTGCCCA CAGGCCGCGC CGCTATGGAT
GAGATGCCTG CGGCGGAAGA CGTGGAAGCC GTCTGGAAAA AACTGAGCAG GATAAGCCAT
GAGGTTTCTT TCGGCGTCAA AACGACGGAA GGGCACCATT ATCGCCGCGT GGCGCTTCAG
GAAGCCCGTG CTCAGGGAAG CAAGCCTGCT CGCCGCGCCA TTCCCACCCG GGACGGCAAG
GGCATTATGT TTATTTCTCA TACCGGGGAA ATACAGCCCT CCGGTTTTCT CCCCATAACG
GCAGGAAACG TCCGGACGGA TGACCCTGGA GAAATCTACC GCACGCACCC CCTTTTCCTC
AAACTCCGGG ATGACAATGC GTTGCAGGGC AAATGCGGAC GGTGTGAGTA CCGTACCATC
TGCGGAGGGT CCCGGTCTCG CGCTTATGCC GTTTACGGAG ACATGATGGC GGAAGACAAC
CTTTGCCCTT ATCAGCCCAG GCTTTCACAA CACCATGATT AA
 
Protein sequence
MRPVFSETDL NERPFLVFWE VTRACALACR HCRAVAQPRP HPDELTHEEA LRLIDQLAEL 
RPPMLVLTGG DPVMRPDILE LVRAASGKGL HVALSPAATA RLLHTDFHAL KEAGVQSMSL
SLDGAHESTH DAFRGVPHTY ERTLRAAEMA KEAGMHLQIN TTITRSTLGE FDDFVELVKK
MKPGMWSVFL LVPTGRAAMD EMPAAEDVEA VWKKLSRISH EVSFGVKTTE GHHYRRVALQ
EARAQGSKPA RRAIPTRDGK GIMFISHTGE IQPSGFLPIT AGNVRTDDPG EIYRTHPLFL
KLRDDNALQG KCGRCEYRTI CGGSRSRAYA VYGDMMAEDN LCPYQPRLSQ HHD