| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0739 |
|---|
| Symbol | |
|---|
| ID | 6273773 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 875469 |
|---|
| End bp | 876071 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 642612790 |
|---|
| Product | transferase hexapeptide repeat containing protein |
|---|
| Protein accession | YP_001877356 |
|---|
| Protein GI | 187735244 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0110] Acetyltransferase (isoleucine patch superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.597159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC TGGAAAAATG CATGGCGGGC GAATGGTACG ACTGCCATGA CAAGGTGTTT
CTGGAATTCA AAAACAAGAC GCACCGGCTC CTGATGAAAT ACAATTCCCT CCCTTACGAC
CATAAGGAGG AAAAGCGCCA GGTGCTCAAG GAAATGCTGG GCAGCGTCGG CACCAAGGTC
TCCATCGGCC ATTCCTTCAT CTGCGATTAC GGCCGCAACA TCCATATCGG GAACAACGTC
ACCGTCAATA CGGGCTGCAC GTTCGTGGAC TGCAACAGGA TCACCATCGG CAACAATGTG
CTGATCGCCC CCAACGTACA GATTTACACC GCTACACACC CCATTGAGCT GAATGAACGC
CTCACTCCCG TGGAAACGGA TGAAGGAATC GAATACATCC GCCATACCTA CGCTCTTCCC
GTAACGATAG AAGACGGTTG CTGGATTGGC GGCGGCGTCA TTATCCTGCC CGGCATTACC
ATCGGAAAAG GAAGCGTCAT CGGAGCCGGC AGCGTGGTCA CCAAAAATAT TCCTCCCGAC
AGCCTGGCGG CGGGGAACCC CTGCAAGGTT ATTCGTAAAA TCAACGGAAG TCGGGAACAA
TGA
|
|---|
| Protein sequence | MTELEKCMAG EWYDCHDKVF LEFKNKTHRL LMKYNSLPYD HKEEKRQVLK EMLGSVGTKV
SIGHSFICDY GRNIHIGNNV TVNTGCTFVD CNRITIGNNV LIAPNVQIYT ATHPIELNER
LTPVETDEGI EYIRHTYALP VTIEDGCWIG GGVIILPGIT IGKGSVIGAG SVVTKNIPPD
SLAAGNPCKV IRKINGSREQ
|
|---|
| |