Gene Amuc_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0717 
Symbol 
ID6273862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp845810 
End bp847114 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content53% 
IMG OID642612769 
Productamino acid permease-associated region 
Protein accessionYP_001877335 
Protein GI187735223 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1113] Gamma-aminobutyrate permease and related permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000167398 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACGGGA AGGCCCCAAA AGAATATCTG TCCCTGTGGA GCGTCATTGC ATTAGGAATA 
GGGTCCATGG TGGGAGCGGG AATTTTCGCC CTCATGGGGC AGGCGACCCT GATGGCGGGA
AAAAATGTAT ATTGGTCCTT TATTCTGGGA GGCGTTGCTG CCCTGCTTTC CGGGTACACC
TACGCCAAAC TGGGTTCCCG TTATCCCGGT TCCGGAGGAA TTATGGATTA TTTCAACGAG
GCTTTTTCCC ATAAGACCCT GTCCGGCGCA CTGACCCTTA TTTACCTGGG AACGCTGGTC
ATTACCGTGG CCCTGGTGGC CAAATCCTTT GGAGCCTATG CGTCCCGCCT GTTTTTACCG
GACAGGGCAG TCACCATTTA TTCCACGGCC CTTTTTGCCA GCGTGGCTAT TTTGCTGCTG
GGGGCATTGA ATATGGGGGG AGCCAGGGCC GTTGGAAAGT CGGAAGTAAT CATGGTGGCA
TTCAAATTAT TGATTTTGAC GGTTTTAATG CTTGCCAGCT TCGGTTCTTC CGTGCCTGTG
GGCGCGGATC CCATTCCGGT GAAAGGGCTG GACGGTTTGC TGGGCAGCGT GGGATTGACA
TTTTTCGCAT TTGCCGGCTA CGGAATGATG GCCAATACGG CGGGCAATCT GAAAAATCCT
TCCAGGACGC TGCCAAGAGC CATTTTTATG GCTATTGGCC TTGTGCTGGC CCTGTACCTG
ATACTCTCCT ACGTAGTACT GTCCAACGTT CCCGCTACTT CCCTGGAAAG CCATACGGAA
ACGGCCGTAG CGCAGGCCGC CTATCCGGTT TTGGGCATGT GGGGCTTCAT GGCCGTATCC
GTAGCGGCTC TCATTGCCAC GGCATCAGCC ATTAATGCCA CCATGTTCAG CATGCTGGAC
ATTTCCCGGG CTCTGGCGCG CAACGGCCAG CTGGGAGCTA TTTTTAAACA GCCTTTCTGG
GGCCACGGAA CGGAGGGTTT TTTCTATCTT TTGCTGGGGA TTCTGGTGAT GACGAATGCC
TTTAACCTGG TAGCCATCGC CAATTTGGCG GGGGCCTGTT TTCTGATCAG CTACCTGGCG
GTGTTCGTCG CCCATTGGCG GCTCCGGAAA GAGACTCAGG GAAATGCGCT GCTTATCATC
CTGGGCTTTC TTCTGATGCT GTTTATTCTG GGGGCGTTCT TTTACCAGAT GTTCTTCAGC
CAGCCTTACC TGATTCCGTT GATTGTGTTG TTTGTAGCCG CCTGCTTCAT CCTGGAATTC
CTAATACGCA GGAAGATTGC GAAAAATGTT CCCGGAGTTT CTTGA
 
Protein sequence
MYGKAPKEYL SLWSVIALGI GSMVGAGIFA LMGQATLMAG KNVYWSFILG GVAALLSGYT 
YAKLGSRYPG SGGIMDYFNE AFSHKTLSGA LTLIYLGTLV ITVALVAKSF GAYASRLFLP
DRAVTIYSTA LFASVAILLL GALNMGGARA VGKSEVIMVA FKLLILTVLM LASFGSSVPV
GADPIPVKGL DGLLGSVGLT FFAFAGYGMM ANTAGNLKNP SRTLPRAIFM AIGLVLALYL
ILSYVVLSNV PATSLESHTE TAVAQAAYPV LGMWGFMAVS VAALIATASA INATMFSMLD
ISRALARNGQ LGAIFKQPFW GHGTEGFFYL LLGILVMTNA FNLVAIANLA GACFLISYLA
VFVAHWRLRK ETQGNALLII LGFLLMLFIL GAFFYQMFFS QPYLIPLIVL FVAACFILEF
LIRRKIAKNV PGVS