Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0717 |
Symbol | |
ID | 6273862 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 845810 |
End bp | 847114 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642612769 |
Product | amino acid permease-associated region |
Protein accession | YP_001877335 |
Protein GI | 187735223 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000167398 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTACGGGA AGGCCCCAAA AGAATATCTG TCCCTGTGGA GCGTCATTGC ATTAGGAATA GGGTCCATGG TGGGAGCGGG AATTTTCGCC CTCATGGGGC AGGCGACCCT GATGGCGGGA AAAAATGTAT ATTGGTCCTT TATTCTGGGA GGCGTTGCTG CCCTGCTTTC CGGGTACACC TACGCCAAAC TGGGTTCCCG TTATCCCGGT TCCGGAGGAA TTATGGATTA TTTCAACGAG GCTTTTTCCC ATAAGACCCT GTCCGGCGCA CTGACCCTTA TTTACCTGGG AACGCTGGTC ATTACCGTGG CCCTGGTGGC CAAATCCTTT GGAGCCTATG CGTCCCGCCT GTTTTTACCG GACAGGGCAG TCACCATTTA TTCCACGGCC CTTTTTGCCA GCGTGGCTAT TTTGCTGCTG GGGGCATTGA ATATGGGGGG AGCCAGGGCC GTTGGAAAGT CGGAAGTAAT CATGGTGGCA TTCAAATTAT TGATTTTGAC GGTTTTAATG CTTGCCAGCT TCGGTTCTTC CGTGCCTGTG GGCGCGGATC CCATTCCGGT GAAAGGGCTG GACGGTTTGC TGGGCAGCGT GGGATTGACA TTTTTCGCAT TTGCCGGCTA CGGAATGATG GCCAATACGG CGGGCAATCT GAAAAATCCT TCCAGGACGC TGCCAAGAGC CATTTTTATG GCTATTGGCC TTGTGCTGGC CCTGTACCTG ATACTCTCCT ACGTAGTACT GTCCAACGTT CCCGCTACTT CCCTGGAAAG CCATACGGAA ACGGCCGTAG CGCAGGCCGC CTATCCGGTT TTGGGCATGT GGGGCTTCAT GGCCGTATCC GTAGCGGCTC TCATTGCCAC GGCATCAGCC ATTAATGCCA CCATGTTCAG CATGCTGGAC ATTTCCCGGG CTCTGGCGCG CAACGGCCAG CTGGGAGCTA TTTTTAAACA GCCTTTCTGG GGCCACGGAA CGGAGGGTTT TTTCTATCTT TTGCTGGGGA TTCTGGTGAT GACGAATGCC TTTAACCTGG TAGCCATCGC CAATTTGGCG GGGGCCTGTT TTCTGATCAG CTACCTGGCG GTGTTCGTCG CCCATTGGCG GCTCCGGAAA GAGACTCAGG GAAATGCGCT GCTTATCATC CTGGGCTTTC TTCTGATGCT GTTTATTCTG GGGGCGTTCT TTTACCAGAT GTTCTTCAGC CAGCCTTACC TGATTCCGTT GATTGTGTTG TTTGTAGCCG CCTGCTTCAT CCTGGAATTC CTAATACGCA GGAAGATTGC GAAAAATGTT CCCGGAGTTT CTTGA
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Protein sequence | MYGKAPKEYL SLWSVIALGI GSMVGAGIFA LMGQATLMAG KNVYWSFILG GVAALLSGYT YAKLGSRYPG SGGIMDYFNE AFSHKTLSGA LTLIYLGTLV ITVALVAKSF GAYASRLFLP DRAVTIYSTA LFASVAILLL GALNMGGARA VGKSEVIMVA FKLLILTVLM LASFGSSVPV GADPIPVKGL DGLLGSVGLT FFAFAGYGMM ANTAGNLKNP SRTLPRAIFM AIGLVLALYL ILSYVVLSNV PATSLESHTE TAVAQAAYPV LGMWGFMAVS VAALIATASA INATMFSMLD ISRALARNGQ LGAIFKQPFW GHGTEGFFYL LLGILVMTNA FNLVAIANLA GACFLISYLA VFVAHWRLRK ETQGNALLII LGFLLMLFIL GAFFYQMFFS QPYLIPLIVL FVAACFILEF LIRRKIAKNV PGVS
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