Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0704 |
Symbol | |
ID | 6273893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 829284 |
End bp | 830537 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642612756 |
Product | hypothetical protein |
Protein accession | YP_001877322 |
Protein GI | 187735210 |
COG category | [S] Function unknown |
COG ID | [COG4198] Uncharacterized conserved protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCACTC TCCATCCCTT CCCCGCCCTG CGTCCTCCTC GGGAACTGGC CGCGCGGGTC TCCTCCCTCC CCTATGATGT CATGAACCAC CGGGAAGCCG AGGAAATGGC CGCCGGAAAT GACGCCTCTT TCCTCCATAT CTGCCGTTCC GACATCGACA CGAGCGAAGC TGCCATCCAT GCCCCGGAAA CCTACGCCAA GGCCAGGGAA AACCTGGAAA GGTTTGTCCG CGAAGGGTAC CTCTTCCGGG ATGAACGGCC GTCTTTCTAC ATCTACCGAC AAATCATGTG GGGGCGCGTA CAGACGGGCA TCGTCGGCTG CGCCTCCGTG GATGAATATG CCAGCGGCGC CATTAAAAAG CACGAACTGA CCCGCAGGGA AAAGGAACTT GACCGGATTG AGCATTTTGA CGCCTGCTCC GCTCAGACGG AACCGGTATT CCTGGCCTAC CGCAAACATG AAGGTCTTTC CGCCATCATC CGGGAATGGA TTAAATTCCA CAAACCCGAA TATGATTTTA CCACGGAGGA CGGCGTCACC CATATCCTGT GGCCCGTTTC CGAGCCCGGC ACGGTGGAAG ACATCCGCAA AAGCTTTGAG GAAGTGGACG CCCTTTACAT TGCGGACGGG CACCACCGCA CGGCTTCCAG CGCTGCCGTT TCCGCCAGGC GCCGCCAGAA ACACCCGGAC TACACGGGGC AGGAAGAATT CAACTACCTG ATGGCTGTCG TCTTTTGTGA TGAAGACCTT TTCATCATGG ACTACAACCG CGTCATACGC GACCTGAACG GCCTGACTGA AGAGGAATTC ATGGAAAAAC TCCGTACCTC CTTTGACATA AATCCTGTGG ATACCATTCC CGGAGAAGGC TACGCCCCCC GCGCCAAGCA TGAGTTCGGC ATGTATCTGA ATGGACGCTG GTATTCCGCC ACGGCCAAAC CGGGAACCTT CCCGGTCGGC CATCCCATCG AAAGCCTGGA CTGCGCCATC CTCCAGGCGA ATGTGCTGGC TCCCATTCTG GGCATTGACG ATCCACGCAC GAGCGACCGC ATCGACTTCG TAGGAGGAAT CCGCGGTCTG GGAGAACTGG AACGCCGCTG TTCCGGGGAA ATGGCGCTGG CTTTCTCCCT GTATCCCGTC ACCATGGCCG ACCTTTTCCG CGTAGCGGAC GCCGGAGAAA TCATGCCTCC CAAATCCACC TGGTTTGAAC CCAAGCTGCG CAGCGGGCTT TTTATCCATA CCATTGAACA ATAA
|
Protein sequence | MSTLHPFPAL RPPRELAARV SSLPYDVMNH REAEEMAAGN DASFLHICRS DIDTSEAAIH APETYAKARE NLERFVREGY LFRDERPSFY IYRQIMWGRV QTGIVGCASV DEYASGAIKK HELTRREKEL DRIEHFDACS AQTEPVFLAY RKHEGLSAII REWIKFHKPE YDFTTEDGVT HILWPVSEPG TVEDIRKSFE EVDALYIADG HHRTASSAAV SARRRQKHPD YTGQEEFNYL MAVVFCDEDL FIMDYNRVIR DLNGLTEEEF MEKLRTSFDI NPVDTIPGEG YAPRAKHEFG MYLNGRWYSA TAKPGTFPVG HPIESLDCAI LQANVLAPIL GIDDPRTSDR IDFVGGIRGL GELERRCSGE MALAFSLYPV TMADLFRVAD AGEIMPPKST WFEPKLRSGL FIHTIEQ
|
| |