Gene Amuc_0704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0704 
Symbol 
ID6273893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp829284 
End bp830537 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content57% 
IMG OID642612756 
Producthypothetical protein 
Protein accessionYP_001877322 
Protein GI187735210 
COG category[S] Function unknown 
COG ID[COG4198] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTC TCCATCCCTT CCCCGCCCTG CGTCCTCCTC GGGAACTGGC CGCGCGGGTC 
TCCTCCCTCC CCTATGATGT CATGAACCAC CGGGAAGCCG AGGAAATGGC CGCCGGAAAT
GACGCCTCTT TCCTCCATAT CTGCCGTTCC GACATCGACA CGAGCGAAGC TGCCATCCAT
GCCCCGGAAA CCTACGCCAA GGCCAGGGAA AACCTGGAAA GGTTTGTCCG CGAAGGGTAC
CTCTTCCGGG ATGAACGGCC GTCTTTCTAC ATCTACCGAC AAATCATGTG GGGGCGCGTA
CAGACGGGCA TCGTCGGCTG CGCCTCCGTG GATGAATATG CCAGCGGCGC CATTAAAAAG
CACGAACTGA CCCGCAGGGA AAAGGAACTT GACCGGATTG AGCATTTTGA CGCCTGCTCC
GCTCAGACGG AACCGGTATT CCTGGCCTAC CGCAAACATG AAGGTCTTTC CGCCATCATC
CGGGAATGGA TTAAATTCCA CAAACCCGAA TATGATTTTA CCACGGAGGA CGGCGTCACC
CATATCCTGT GGCCCGTTTC CGAGCCCGGC ACGGTGGAAG ACATCCGCAA AAGCTTTGAG
GAAGTGGACG CCCTTTACAT TGCGGACGGG CACCACCGCA CGGCTTCCAG CGCTGCCGTT
TCCGCCAGGC GCCGCCAGAA ACACCCGGAC TACACGGGGC AGGAAGAATT CAACTACCTG
ATGGCTGTCG TCTTTTGTGA TGAAGACCTT TTCATCATGG ACTACAACCG CGTCATACGC
GACCTGAACG GCCTGACTGA AGAGGAATTC ATGGAAAAAC TCCGTACCTC CTTTGACATA
AATCCTGTGG ATACCATTCC CGGAGAAGGC TACGCCCCCC GCGCCAAGCA TGAGTTCGGC
ATGTATCTGA ATGGACGCTG GTATTCCGCC ACGGCCAAAC CGGGAACCTT CCCGGTCGGC
CATCCCATCG AAAGCCTGGA CTGCGCCATC CTCCAGGCGA ATGTGCTGGC TCCCATTCTG
GGCATTGACG ATCCACGCAC GAGCGACCGC ATCGACTTCG TAGGAGGAAT CCGCGGTCTG
GGAGAACTGG AACGCCGCTG TTCCGGGGAA ATGGCGCTGG CTTTCTCCCT GTATCCCGTC
ACCATGGCCG ACCTTTTCCG CGTAGCGGAC GCCGGAGAAA TCATGCCTCC CAAATCCACC
TGGTTTGAAC CCAAGCTGCG CAGCGGGCTT TTTATCCATA CCATTGAACA ATAA
 
Protein sequence
MSTLHPFPAL RPPRELAARV SSLPYDVMNH REAEEMAAGN DASFLHICRS DIDTSEAAIH 
APETYAKARE NLERFVREGY LFRDERPSFY IYRQIMWGRV QTGIVGCASV DEYASGAIKK
HELTRREKEL DRIEHFDACS AQTEPVFLAY RKHEGLSAII REWIKFHKPE YDFTTEDGVT
HILWPVSEPG TVEDIRKSFE EVDALYIADG HHRTASSAAV SARRRQKHPD YTGQEEFNYL
MAVVFCDEDL FIMDYNRVIR DLNGLTEEEF MEKLRTSFDI NPVDTIPGEG YAPRAKHEFG
MYLNGRWYSA TAKPGTFPVG HPIESLDCAI LQANVLAPIL GIDDPRTSDR IDFVGGIRGL
GELERRCSGE MALAFSLYPV TMADLFRVAD AGEIMPPKST WFEPKLRSGL FIHTIEQ