Gene Amuc_0636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0636 
Symbol 
ID6274171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp748098 
End bp749660 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content48% 
IMG OID642612688 
Productputative flippase 
Protein accessionYP_001877254 
Protein GI187735142 
COG category[R] General function prediction only 
COG ID[COG2244] Membrane protein involved in the export of O-antigen and teichoic acid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.765115 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGAAT CCCGCGTAAA GAAAAGCCTG TTGAACGCCA GGGTCAATCT CATTTTTTAT 
GTTTTGATTC TTCTCATTTC CTTTTTTTCA AGAAAGATAT TCTTGAATTG CCTGGGTGCC
GATTTTGTCG GTTTGACGGG AACATTAATG AGTCTGCTGA ATTTCCTCAA TTTGGCGGAA
CTTGGTATAA GCACGGCTAT CGGGTATGTG CTTTACAAGC CGATCTTTGA GCATGATGAG
ACCAGGATTA ATGAAATTAT CTCCGTGCTG GGATACATGT ACCGGTGGAT AGGGCGGATA
ATCATTGCGG CTGGAGTAGC GCTTTCCTGT TTCCTGCCGG TTATTTTCCC TTCCACAGGT
TTTTCCTATG GAATCATCTA TTTTGCTTAT TATTCCTTTC TGGCCTCTTC CCTGATCGGG
TATTTTGCCA ACTACAGGCA GACCCTTTTG GGAGCGGACC AGAGGAATTA CGTAGTGGCG
TTTTATTTCC AGACGGCATC CATCATCAAA ATCATATGCC AGATGCTGTC TGCATGGTAT
ACGGGAAGCT ATTATTTATG GATAGGGATA GAGCTGTTCT TCGGCATTAT TTATTCCTTC
ATCCTGAATT GGAAGATCAA TCAGGTCTAT CCCTGGCTGA AGAGCAATGT GGCCCTGGGA
AAGGAGCTGT TCAAAAAATA TCCTGAAGTC ACTAAATACA CCAAGCAGTT GTTTATGCAT
CGGCTGGGAA GCTTTTTCCA GTTCCAGGTG ACGCCGTTTC TGGTATATGC CTTTGTTTCC
CTCCAGATGG CGGCCTACTT CGGCAACTAT TCCACCATTG TGGAGAAACT GCACCTTCTG
GTCAATAACC TGCTCGGCAG TACGGAAGCC AGTGTGGGCA ACTTGATTGC GGAGGGAAAT
GCGGGAAAAA TCCGCAAGGT GTTCAGTGAA TTGTTTTCCC TGCGCATGCT GATTGCCGGG
ACGGTATGTT TCCCCCTTTA CCAGCTTTTG GAGCCATTCA TCACGCTTTG GCTGGGAGCG
GGCTATATCC TTCCCCGGGA AATCATGCTG CTGCTCGTTA TCAGGCTGTT CATCACCATT
ACGCGGGGGG TTGTGGATCA GTTTTTATAC GGTTACGGTT TGTTCTGGGA TGTATGGGCT
CCTCTTGCGG AAAGCGTGAT CAACATTTCC GTGGCGATCA TCGGAGGTTA TTTATGGGGA
TTGCCCGGCG TTTTGCTGGG GGGCATCTCC AGCCTGATAC TTATTGTGGG CATATGGAAG
CCTTTCATGC TGTATAACTG GGGATTCAGG AAAAATGTGA TGAACTACTG GTTCCAATTC
GGTTACCAGC TGGCGCTGAT TTTGATTTCG GCCGTGTTCA TGGGCTGGAT CTGGAAATTT
GTTCCTCTGC AGCCTTCCGC GTCTTTCTTT TCCTGGTTTT TATGCGCCTT CCTCATGGCC
GCTTCTTATG GAGGTGTGAC GGTTCTTTTA ATGTATTGCG GTACGCAGGG CATGCGCGGA
ATGGTGCGCC GTGCGCTGGA GATGGCGGGA ACCCGGTTGC CGTGGCGGAA AAAAACTGAA
TAG
 
Protein sequence
MEESRVKKSL LNARVNLIFY VLILLISFFS RKIFLNCLGA DFVGLTGTLM SLLNFLNLAE 
LGISTAIGYV LYKPIFEHDE TRINEIISVL GYMYRWIGRI IIAAGVALSC FLPVIFPSTG
FSYGIIYFAY YSFLASSLIG YFANYRQTLL GADQRNYVVA FYFQTASIIK IICQMLSAWY
TGSYYLWIGI ELFFGIIYSF ILNWKINQVY PWLKSNVALG KELFKKYPEV TKYTKQLFMH
RLGSFFQFQV TPFLVYAFVS LQMAAYFGNY STIVEKLHLL VNNLLGSTEA SVGNLIAEGN
AGKIRKVFSE LFSLRMLIAG TVCFPLYQLL EPFITLWLGA GYILPREIML LLVIRLFITI
TRGVVDQFLY GYGLFWDVWA PLAESVINIS VAIIGGYLWG LPGVLLGGIS SLILIVGIWK
PFMLYNWGFR KNVMNYWFQF GYQLALILIS AVFMGWIWKF VPLQPSASFF SWFLCAFLMA
ASYGGVTVLL MYCGTQGMRG MVRRALEMAG TRLPWRKKTE