Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0636 |
Symbol | |
ID | 6274171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 748098 |
End bp | 749660 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642612688 |
Product | putative flippase |
Protein accession | YP_001877254 |
Protein GI | 187735142 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.765115 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGAAT CCCGCGTAAA GAAAAGCCTG TTGAACGCCA GGGTCAATCT CATTTTTTAT GTTTTGATTC TTCTCATTTC CTTTTTTTCA AGAAAGATAT TCTTGAATTG CCTGGGTGCC GATTTTGTCG GTTTGACGGG AACATTAATG AGTCTGCTGA ATTTCCTCAA TTTGGCGGAA CTTGGTATAA GCACGGCTAT CGGGTATGTG CTTTACAAGC CGATCTTTGA GCATGATGAG ACCAGGATTA ATGAAATTAT CTCCGTGCTG GGATACATGT ACCGGTGGAT AGGGCGGATA ATCATTGCGG CTGGAGTAGC GCTTTCCTGT TTCCTGCCGG TTATTTTCCC TTCCACAGGT TTTTCCTATG GAATCATCTA TTTTGCTTAT TATTCCTTTC TGGCCTCTTC CCTGATCGGG TATTTTGCCA ACTACAGGCA GACCCTTTTG GGAGCGGACC AGAGGAATTA CGTAGTGGCG TTTTATTTCC AGACGGCATC CATCATCAAA ATCATATGCC AGATGCTGTC TGCATGGTAT ACGGGAAGCT ATTATTTATG GATAGGGATA GAGCTGTTCT TCGGCATTAT TTATTCCTTC ATCCTGAATT GGAAGATCAA TCAGGTCTAT CCCTGGCTGA AGAGCAATGT GGCCCTGGGA AAGGAGCTGT TCAAAAAATA TCCTGAAGTC ACTAAATACA CCAAGCAGTT GTTTATGCAT CGGCTGGGAA GCTTTTTCCA GTTCCAGGTG ACGCCGTTTC TGGTATATGC CTTTGTTTCC CTCCAGATGG CGGCCTACTT CGGCAACTAT TCCACCATTG TGGAGAAACT GCACCTTCTG GTCAATAACC TGCTCGGCAG TACGGAAGCC AGTGTGGGCA ACTTGATTGC GGAGGGAAAT GCGGGAAAAA TCCGCAAGGT GTTCAGTGAA TTGTTTTCCC TGCGCATGCT GATTGCCGGG ACGGTATGTT TCCCCCTTTA CCAGCTTTTG GAGCCATTCA TCACGCTTTG GCTGGGAGCG GGCTATATCC TTCCCCGGGA AATCATGCTG CTGCTCGTTA TCAGGCTGTT CATCACCATT ACGCGGGGGG TTGTGGATCA GTTTTTATAC GGTTACGGTT TGTTCTGGGA TGTATGGGCT CCTCTTGCGG AAAGCGTGAT CAACATTTCC GTGGCGATCA TCGGAGGTTA TTTATGGGGA TTGCCCGGCG TTTTGCTGGG GGGCATCTCC AGCCTGATAC TTATTGTGGG CATATGGAAG CCTTTCATGC TGTATAACTG GGGATTCAGG AAAAATGTGA TGAACTACTG GTTCCAATTC GGTTACCAGC TGGCGCTGAT TTTGATTTCG GCCGTGTTCA TGGGCTGGAT CTGGAAATTT GTTCCTCTGC AGCCTTCCGC GTCTTTCTTT TCCTGGTTTT TATGCGCCTT CCTCATGGCC GCTTCTTATG GAGGTGTGAC GGTTCTTTTA ATGTATTGCG GTACGCAGGG CATGCGCGGA ATGGTGCGCC GTGCGCTGGA GATGGCGGGA ACCCGGTTGC CGTGGCGGAA AAAAACTGAA TAG
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Protein sequence | MEESRVKKSL LNARVNLIFY VLILLISFFS RKIFLNCLGA DFVGLTGTLM SLLNFLNLAE LGISTAIGYV LYKPIFEHDE TRINEIISVL GYMYRWIGRI IIAAGVALSC FLPVIFPSTG FSYGIIYFAY YSFLASSLIG YFANYRQTLL GADQRNYVVA FYFQTASIIK IICQMLSAWY TGSYYLWIGI ELFFGIIYSF ILNWKINQVY PWLKSNVALG KELFKKYPEV TKYTKQLFMH RLGSFFQFQV TPFLVYAFVS LQMAAYFGNY STIVEKLHLL VNNLLGSTEA SVGNLIAEGN AGKIRKVFSE LFSLRMLIAG TVCFPLYQLL EPFITLWLGA GYILPREIML LLVIRLFITI TRGVVDQFLY GYGLFWDVWA PLAESVINIS VAIIGGYLWG LPGVLLGGIS SLILIVGIWK PFMLYNWGFR KNVMNYWFQF GYQLALILIS AVFMGWIWKF VPLQPSASFF SWFLCAFLMA ASYGGVTVLL MYCGTQGMRG MVRRALEMAG TRLPWRKKTE
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