Gene Amuc_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0634 
Symbol 
ID6274177 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp745621 
End bp746568 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content51% 
IMG OID642612686 
Productglycosyl transferase family 8 
Protein accessionYP_001877252 
Protein GI187735140 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1442] Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value0.469103 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG TATACGCTAC AGACGATAAC GGCGCGCTGG GAACGGGCGT GAGCATTGTG 
TCCCTCATGG AGAATTTGCC GCCCGGCGTT CATGCCGATA TTTACATCAT GACTGGCGGG
TTAAGCGGGG ATAATACGGC CCGTTTCCAT TCCCTGCAAC AGGGCTACAA TCTCCATTTG
CACTTCATTG ACATGAAGGA TAAATATACG GATTTCCCCG TCGGTTCCAA ATGGTCGGCG
GCGACGTATT ACCGCCTTGG CCTCGCAGGG GAACTTCCCG CCACGGTAGA ACGCGCCCTT
TACGTGGATA TTGATACCAT TTTCAACAGG GACATAAGCC CCATGTATGA ATCCGAATTC
GGAGATTGCC TCATTGCCGG CGTTTTCACC ACGGAAGATT TATCCGAGGA GTCTTTTTCA
CGCTGGAAGA GAGAAATGAA TCTGGGCCGG GACTCCATTT ACATCAATGC CGGCGTCATT
CTTTACCATA TCGGAAGAAT ACGTGAAGAA TGTTTTGAAT CCCAGGTTTT ATCCTGGGCG
AAAAACAATA TTCACCGCCT TTCCTGGCAG GATCAGGATA TTTTGAATGT ATGCTATCAG
CAGCGTATCT TGTTGCTTCA CCCCATGTGG AACATTTGCG ACGGGGCTAT CTGGTCCATT
CGCTGGGAAG GCGTGACAAG CTTCAGGAAT AATCCCCTAA AGCCGGCAGA CCTGCTGGAA
GCCGCCAGGC GGCCGGGCAT TATCCACTAC TGGGGCCATC CCAAACCCTG GCATCCCAAC
AGCATTCGCC AGGATTACGG ATTGTTCTAC AAGTATTGGA AGAAATCTCC GTGGAAAGAT
GACATCAGGG ATTTCCGGAA GCAAAACGAT CCCGGCCGGA TGTTCATCTC CAAAATGAGA
TGCCTCCTGG GAAAGGGTAA ACGGCTTTTA CAAGGCAGGC ATCAGTAG
 
Protein sequence
MNIVYATDDN GALGTGVSIV SLMENLPPGV HADIYIMTGG LSGDNTARFH SLQQGYNLHL 
HFIDMKDKYT DFPVGSKWSA ATYYRLGLAG ELPATVERAL YVDIDTIFNR DISPMYESEF
GDCLIAGVFT TEDLSEESFS RWKREMNLGR DSIYINAGVI LYHIGRIREE CFESQVLSWA
KNNIHRLSWQ DQDILNVCYQ QRILLLHPMW NICDGAIWSI RWEGVTSFRN NPLKPADLLE
AARRPGIIHY WGHPKPWHPN SIRQDYGLFY KYWKKSPWKD DIRDFRKQND PGRMFISKMR
CLLGKGKRLL QGRHQ