| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0615 |
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| Symbol | carB |
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| ID | 6274698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 721979 |
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| End bp | 725173 |
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| Gene Length | 3195 bp |
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| Protein Length | 1064 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642612666 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_001877233 |
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| Protein GI | 187735121 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism
[I] Lipid transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ)
[COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.120313 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAC GCGAAGATAT CCGCAAAATC CTCATTATCG GCTCAGGCCC CATCATCATC
GGCCAGGCCT GCGAGTTCGA CTACTCCGGC ACCCAGGCCT GCAAGGCCCT CCGCGCCGAA
GGTTACGACG TCGTTCTGGT GAATTCCAAC CCCGCCACCA TCATGACGGA CCCCGGCATG
GCGGACCACA CCTACATTGA GCCTCTGACC GTGGACCGCA TCACGGCCGT GATTGAGAAG
GAACGCCCGG ATGCCCTGCT GCCCAACCTG GGCGGCCAGA CGGCCCTGAA CCTGGCTTCC
AAGCTGCATG AGGAAGGCAT CCTGAAACAG TACGGAGTGG AAGTCATCGG CGTGGATCTG
GAAGCCATCG CCCGCGGCGA AGACCGCATC ATTTTCAAGG AAACCATGGA CAGGATCGGC
GTGCCGGTCG CCAAGTCCGA ACCCGTCTAC TCCGTGGAGG AAGCTGAAAA GGTGGCCTCT
GAACTGGGCT ATCCCGTCGT GCTGCGCCCC GCCTACACCA TGGGCGGCAC GGGCGGCGGC
ATCGTTTACA ACGTGGAAGA ACTGCGCCAG GTAGTCCCCC GCGGCCTGGC CGCCTCCCTC
ATCAACCAGG TGCTGGTGGA AGAATGCGTG CTGGGATGGG AGGAACTGGA ACTGGAAGTC
GTCCGCGACG CCAAGGGACA AAAGATTACC GTTTGCTTTA TTGAGAACGT GGATCCCATG
GGCGTGCACA CCGGAGACAG CTTCTGCGTG GCTCCCATGC TGACCGTTCC GCAGGAAGTG
CAGGATAAGC TTCAGGATTA TTCCTACCGC ATTCTGGACG CCATCGGCGT TACGGGAGGC
ACAAACGTGC AGTTCGCCCA CAACCGGGAG GACAACCGCA TCATCGTTAT TGAAATCAAC
CCCCGTACAT CCCGTTCCTC CGCCCTGGCT TCCAAGGCCA CCGGCTTCCC TATCGCCTCC
GTCTCCACCA AGCTGGCCTC CGGCGTCACG ATGGACGAAC TTCCCTACTG GCGCAAAGGC
TCCCTGGAAA AATACGAACC TTACGGCGAC TATGTGGTCG TGAAGTTCGC ACGCTGGGCC
TTTGAAAAAT TCCCCAAGGC AGCCGACAAG CTGGGCACCC AGATGAAAGC CGTGGGAGAA
GTAATGAGCA TCGGGCAGAA TTTCAAGGAA GCTTTCCAGA AGGCCGTGCG CTCTCTGGAA
ATCGGACGCG CCGGCCTGGG CCGCGTGAAA AAGCTGGAAG CCCTCTCCAC CCCGGAATTG
CGTGAAAAAA TCACGTACGG CAACAGCGAA CGCTTCTTCC AGATTTACGA ACTCCTGCGC
CGTGGCGTAG CCGTGGAGGA AATCGTGAAG CTGACCCGCA TCACTCCGTA TTTCATTGAA
CAGATGAAGG AACTGGCGGA CTTTGACTTT TCCCTGGATG GGCAGGACTG GGATTCCCTT
TCCGCGGAAA CCCTGCGCCA GGCCAAGGAA ATGGGCTTTT CCGACAAATA CCTGGCCCAG
ATTTTCGGGG TACCGGAAAA GGCCGTCCGC GCCCGCCGGC AGAAAGACGG CATCACGGCC
ACCTTCCGCA TCGTGCCCGT CAGCGGCGTG GAACACGCGG AATACTACTA CTCCACTTAC
AGCGGCGCGG CGGACGAAGT TCCCGTGAAC GACAAGAAGA AAATCATGAT TCTGGGCGGC
GGCCCCAACC GCATCGGCCA GGGCATCGAA TTCGACTATA CCTGCGTGCA TGCCGCCTTC
ACCCTGCGCG ACCACGGGTA TGAATCCATC ATGGTGAACT GCAACCCGGA AACGGTTTCT
ACGGACTTTG ACACGGCCAA CAAGCTGTAC TTTGAACCCG TGACTGTGGA AGACGTGCTG
GCTATTTACG AGAAGGAAAA GCCGGAAGGC GTCATCGTCC AGTTCGGAGG CCAGACCCCG
CTTAACATCG CCCAGGCCCT CAAAGACGCC GGCGTGAAAA TCATGGGAAC CCAGCCGGAA
GGCATCCGTC TGGCGGAAGA CCGCGAATAT TTCCGTGAAC GCATGATCGC CCTGAATATC
CGCCAGCCGG AAAGCGGCAC GGCCCGTTCC CTGGAGGAAG CCGTGGAACT GGGGCGCCGC
ATCGGCTACC CGGTCATGGT GCGCCCCTCC TTCGTGCTGG GCGGCCGCGG CATGGAAGTC
ATTTACGATG AAGAAAACCT GAAGCGCTAC GGCGTGGAGG CCATCCAGGT CAGCCCGGAA
TATCCCATGC TGATCGATCG TTTTCTGGAC AATGCCATTG AGGCGGAAGT GGATGCTCTG
GCCGACGGCA CGGACACTTT TGTAGCCACG GTCATGGAAC ACATTGAGCT GGCCGGCATC
CATTCCGGCG ACTCCGCCTG CGCCATCCCT CCCGTGACAA TCGCTCCCAA GCACATCCGC
ACCATTGAGG AACATGCCGC CAAAATTGCC CAGGACTTCC AGGTAAAGGG CATTCTGAAC
GTGCAGTTCG CCATCTGCAA CGATGAGGTT TACATCATTG AGGCCAATCC CCGCGCCTCC
CGCACGGTGC CGATCGTCTC CAAGGTAACG GGCATCTCCC TGGCGCGCTA CGCCACGGAA
ATCATGCTGG GCAAGAAACT CAAGGAGCTG GGCCTGAAGT CGCGCGCCTG CCGTTTCATC
GGCGTGAAGG AAGCTGTCTT CCCCTTCAAC ATGTTCCCGG AAGTGGACCC CGTACTGGGG
CCGGAAATGC GCGCCACGGG TGAAGTCATG GGCATTGCGG ACAACTTCGG CATGGCCTAC
TACAAGGCCC AGGAAGCTGC GGGCTGCATT CTGCCTACCG CCGGCAAGGT GCTCGTCACG
GTTTCCGACC GGGATAAGAA GTTCATCGAA CCCATCGCCC GGGACCTGAT TTCCCTGGGA
TTTACGATTG TCTCCACCGG CGGCACCGCA GAATACCTGC GCGGCCAGGG CGTGGAAACG
GAAGTAGTCA ACAAGCTGCA TGAAGGCCGC CCGAACCTGG GCGACATGAT CACGAACAAG
CAGATCGACC TGATTATCAA CACTCCGGTG GACCGCACCA GTATGATTGA CGACTCCTTC
ATCCGCATGC AGTCCATCCA GAAGAAAATT CCGTACATGA CTACCATCGC AGCCGCCAGA
GCCACGGTGG AGGGCATCCG CTCCGCCCAG CACGTGAAGG TATCACCCCG TTCCCTCCAG
GAATACCATT CCTGA
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| Protein sequence | MAKREDIRKI LIIGSGPIII GQACEFDYSG TQACKALRAE GYDVVLVNSN PATIMTDPGM
ADHTYIEPLT VDRITAVIEK ERPDALLPNL GGQTALNLAS KLHEEGILKQ YGVEVIGVDL
EAIARGEDRI IFKETMDRIG VPVAKSEPVY SVEEAEKVAS ELGYPVVLRP AYTMGGTGGG
IVYNVEELRQ VVPRGLAASL INQVLVEECV LGWEELELEV VRDAKGQKIT VCFIENVDPM
GVHTGDSFCV APMLTVPQEV QDKLQDYSYR ILDAIGVTGG TNVQFAHNRE DNRIIVIEIN
PRTSRSSALA SKATGFPIAS VSTKLASGVT MDELPYWRKG SLEKYEPYGD YVVVKFARWA
FEKFPKAADK LGTQMKAVGE VMSIGQNFKE AFQKAVRSLE IGRAGLGRVK KLEALSTPEL
REKITYGNSE RFFQIYELLR RGVAVEEIVK LTRITPYFIE QMKELADFDF SLDGQDWDSL
SAETLRQAKE MGFSDKYLAQ IFGVPEKAVR ARRQKDGITA TFRIVPVSGV EHAEYYYSTY
SGAADEVPVN DKKKIMILGG GPNRIGQGIE FDYTCVHAAF TLRDHGYESI MVNCNPETVS
TDFDTANKLY FEPVTVEDVL AIYEKEKPEG VIVQFGGQTP LNIAQALKDA GVKIMGTQPE
GIRLAEDREY FRERMIALNI RQPESGTARS LEEAVELGRR IGYPVMVRPS FVLGGRGMEV
IYDEENLKRY GVEAIQVSPE YPMLIDRFLD NAIEAEVDAL ADGTDTFVAT VMEHIELAGI
HSGDSACAIP PVTIAPKHIR TIEEHAAKIA QDFQVKGILN VQFAICNDEV YIIEANPRAS
RTVPIVSKVT GISLARYATE IMLGKKLKEL GLKSRACRFI GVKEAVFPFN MFPEVDPVLG
PEMRATGEVM GIADNFGMAY YKAQEAAGCI LPTAGKVLVT VSDRDKKFIE PIARDLISLG
FTIVSTGGTA EYLRGQGVET EVVNKLHEGR PNLGDMITNK QIDLIINTPV DRTSMIDDSF
IRMQSIQKKI PYMTTIAAAR ATVEGIRSAQ HVKVSPRSLQ EYHS
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