Gene Amuc_0607 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0607 
Symbol 
ID6275836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp715723 
End bp716484 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content53% 
IMG OID642612658 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_001877225 
Protein GI187735113 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones67 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA ATAAACGGTT CATTTTCAGG TTATGTGCAG CAGCCGCGCT TTTTCTTAGC 
CTTTTTCCCC TGCAGGCCGG AGAATGCACG CTGATGAGCT ATAACGTAAA GAACGGCACC
GGCATGGACG GCAGGAGGGA TTATGACCGC ACGGCCCGGG TAATCACGGA GGAAAAACCG
GATGTCGCGG CCCTTCAGGA GCTGGACCAG GGGACAATCA GAAGCGGCGG CAGGGATACC
CTGCAGGAAT TGGCCGCAAG GACAACGTTG ACGGGGACCT ATGCCAAGGC CATTGATTAT
TCAGGCGGTT CCTATGGAGT AGGTATTTTA TCCAGGGAAA AACCTTTGAG CGTCAAACGG
ATTCCTTTAC CCGGCAGGGA GGAGGCCCGT GTACTGTTGA TGGCCGAGTT CAGGGATTAC
TGGTTTTGCG TCACGCATTT GTCCCTGACC AGGGAAGACA GCAACGCTTC CATTGATATG
ATTGCCGCCC TGGCCGCAAA ATGCAGCAAG CCCTTTTTTA TTGCAGGGGA TTTCAATTTA
ACGCCGGATT CGGAACCGAT AACCCGGATG AAAAAATATT TCATCCTGCT GAGCGATCCG
GCCCAAAAAA CGTTTCCCGC CGGGCATCCG AAGGAATGCA TTGATTACAT CTGGATGTAC
AGGGGAAAAA AGACGGAGGC GTTCCATGTG AAGGAACGCA GGGTAATTGA AGCTCCCGCC
GCCTCTGACC ACCGCCCGGT CAAGGTGACG GTCAGCTATT GA
 
Protein sequence
MKGNKRFIFR LCAAAALFLS LFPLQAGECT LMSYNVKNGT GMDGRRDYDR TARVITEEKP 
DVAALQELDQ GTIRSGGRDT LQELAARTTL TGTYAKAIDY SGGSYGVGIL SREKPLSVKR
IPLPGREEAR VLLMAEFRDY WFCVTHLSLT REDSNASIDM IAALAAKCSK PFFIAGDFNL
TPDSEPITRM KKYFILLSDP AQKTFPAGHP KECIDYIWMY RGKKTEAFHV KERRVIEAPA
ASDHRPVKVT VSY