Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0607 |
Symbol | |
ID | 6275836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 715723 |
End bp | 716484 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642612658 |
Product | Endonuclease/exonuclease/phosphatase |
Protein accession | YP_001877225 |
Protein GI | 187735113 |
COG category | [R] General function prediction only |
COG ID | [COG3568] Metal-dependent hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 67 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA ATAAACGGTT CATTTTCAGG TTATGTGCAG CAGCCGCGCT TTTTCTTAGC CTTTTTCCCC TGCAGGCCGG AGAATGCACG CTGATGAGCT ATAACGTAAA GAACGGCACC GGCATGGACG GCAGGAGGGA TTATGACCGC ACGGCCCGGG TAATCACGGA GGAAAAACCG GATGTCGCGG CCCTTCAGGA GCTGGACCAG GGGACAATCA GAAGCGGCGG CAGGGATACC CTGCAGGAAT TGGCCGCAAG GACAACGTTG ACGGGGACCT ATGCCAAGGC CATTGATTAT TCAGGCGGTT CCTATGGAGT AGGTATTTTA TCCAGGGAAA AACCTTTGAG CGTCAAACGG ATTCCTTTAC CCGGCAGGGA GGAGGCCCGT GTACTGTTGA TGGCCGAGTT CAGGGATTAC TGGTTTTGCG TCACGCATTT GTCCCTGACC AGGGAAGACA GCAACGCTTC CATTGATATG ATTGCCGCCC TGGCCGCAAA ATGCAGCAAG CCCTTTTTTA TTGCAGGGGA TTTCAATTTA ACGCCGGATT CGGAACCGAT AACCCGGATG AAAAAATATT TCATCCTGCT GAGCGATCCG GCCCAAAAAA CGTTTCCCGC CGGGCATCCG AAGGAATGCA TTGATTACAT CTGGATGTAC AGGGGAAAAA AGACGGAGGC GTTCCATGTG AAGGAACGCA GGGTAATTGA AGCTCCCGCC GCCTCTGACC ACCGCCCGGT CAAGGTGACG GTCAGCTATT GA
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Protein sequence | MKGNKRFIFR LCAAAALFLS LFPLQAGECT LMSYNVKNGT GMDGRRDYDR TARVITEEKP DVAALQELDQ GTIRSGGRDT LQELAARTTL TGTYAKAIDY SGGSYGVGIL SREKPLSVKR IPLPGREEAR VLLMAEFRDY WFCVTHLSLT REDSNASIDM IAALAAKCSK PFFIAGDFNL TPDSEPITRM KKYFILLSDP AQKTFPAGHP KECIDYIWMY RGKKTEAFHV KERRVIEAPA ASDHRPVKVT VSY
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