Gene Amuc_0597 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0597 
Symbol 
ID6275843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp706806 
End bp707312 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content53% 
IMG OID642612648 
Producthypothetical protein 
Protein accessionYP_001877215 
Protein GI187735103 
COG category[R] General function prediction only 
COG ID[COG1853] Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAAAA AGATTGAACC AAAGGAGATT CAGGATAATG CCGTACAATT GATTGGGGAC 
GATTGGATGC TGGTGACGGC GGGTTCTCCG GAGCATTTCA ACATGATGAC GGCCAGTTGG
GGCGGTTTGG GGTTCATGTG GAAGAAGCCT GTGGCGTTTG TAGTTATCCG CCCCCAGCGC
CATACCTTCC GTTTTATTGA GGCCGGGGAC GAGCTGACGC TTTCCTTTTT CAGCCATGAG
TACCATAAGG CTCTGACCGT GTGCGGAACA ACGAGCGGAC TGGATACGGA CAAGGTGGCC
GCTTCCGGCC TGACGCCATA CGTGACGGAG AACGGCAATG TAAGTTTTAC GGAAGCGCGC
CTGGTGCTGG AGTGCCGCAA GCTGTACGCG GAGCCTCTCA ACCCGGAAGC TTTTCTGGAT
AAATCTATTG TGCCGGAGTG GTATGCCGCC GGGGATTTCC ATAAGATGTA TATTGTGGAA
ATCCTGAACG TATGGGTGAA GGAATAG
 
Protein sequence
MMKKIEPKEI QDNAVQLIGD DWMLVTAGSP EHFNMMTASW GGLGFMWKKP VAFVVIRPQR 
HTFRFIEAGD ELTLSFFSHE YHKALTVCGT TSGLDTDKVA ASGLTPYVTE NGNVSFTEAR
LVLECRKLYA EPLNPEAFLD KSIVPEWYAA GDFHKMYIVE ILNVWVKE