| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0561 |
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| Symbol | |
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| ID | 6275519 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 660401 |
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| End bp | 661639 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612610 |
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| Product | sun protein |
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| Protein accession | YP_001877179 |
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| Protein GI | 187735067 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
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| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.494153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGAACA ATCCCCCCTC CCCCCGCCAG ACAGCACTAA ATTGCCTGAG GAGCTGGCAT
GCAGGCCGCT CCTTCGCGGA AACCCTCGTG GACCGGGAAT GTTCACGAAC CGCGCTTCCA
TCGGCAGACA GGCACCTGGT GCAGGCTTTG GTCTTCAGCG TATTGCGCAA CCAGACCTGG
CTGGACCACG TCATCGGAAC CCTCCGGAAA GGCAGGCTGG ACGTGGAAGC GCGTCTTATT
CTCCAACTGG GGTTGAGCCA GCTTTTTCTG CTGGGCATGG CGGACCACGC CGCTGTGTAT
GAAACCGTGA ATCTCGCGTC CGTACGCCTG AGAGGACTGG TAAACGCTAT CCTGCGCAAC
GCTTTGCGGC GGGAGAAAAC CATTCTGGAG GAACGGGAAA AACTTCCGCT TTCCATTCAT
TATTCCACCC CCGCGTGGCT GGTACGGAGA TGGACGGAAC AAATGGGGCC GCAAATGGCC
CGCGACCTGC TCCGCTGGAA CAATACCACG CCGCGCCTGT ATGTGCGCGC CAATCCTCTG
ATGCCCATGA AAAATATTCC GGCCTCCCTC GCCCCGCTGG ACCGCGCGCC CGGCTGGTTC
TCCGTGGAAG GCCTTCTGCC GCTGGAGGAA ATTAAAACAG GCTCCCTTTA CGTAGCGGAT
CCTTCCACCC GTTATTCCAT TGATTTGCTG GCCCCACAGC CCGGAGAGGA AATTCTGGAC
GCCTGCGCCG CCCCCGGCGG CAAATCCGCC GCCATCATCG CCGCTACCGG AGGCAAAGCC
CACCTGACCG CCACGGATCT CCACGAACAC CGGCTGCCCA CCCTGAAGGA AAACCTGGAC
AGGCAGGGTT CTTCCTTCGT CAGGACGGCG CAGGCGGACT GGTCCCTTCC CTGCCGCACG
GAATGGAAGG GCCGCTTTGA CGCCGTGCTT CTGGACGTTC CCTGTTCCAA CACCGGAGTC
ATCCAACGCC GCGTGGACGT GCGCTGGCGC CTGACTCCGG AGGAAATCCG TCGCCTGACC
GCACTCCAGA AGACCATCCT GGAAAATGCC TCCCGCGCCG TCAAACCGGG CGGCAGACTG
GTTTATTCCA CCTGTTCCAT TGACGCGGAG GAAGACGGAC TGCTGATCAG GGACTTTTTG
CAGAACCATC CGGAATGGAC GCTGAAAGAA GAAAAACTTA TCCTTCCCCA CGAGGAAAAA
TCGGACGGCG CGTATGCGGC CCTTTTGATC TGTGCTTGA
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| Protein sequence | MKNNPPSPRQ TALNCLRSWH AGRSFAETLV DRECSRTALP SADRHLVQAL VFSVLRNQTW
LDHVIGTLRK GRLDVEARLI LQLGLSQLFL LGMADHAAVY ETVNLASVRL RGLVNAILRN
ALRREKTILE EREKLPLSIH YSTPAWLVRR WTEQMGPQMA RDLLRWNNTT PRLYVRANPL
MPMKNIPASL APLDRAPGWF SVEGLLPLEE IKTGSLYVAD PSTRYSIDLL APQPGEEILD
ACAAPGGKSA AIIAATGGKA HLTATDLHEH RLPTLKENLD RQGSSFVRTA QADWSLPCRT
EWKGRFDAVL LDVPCSNTGV IQRRVDVRWR LTPEEIRRLT ALQKTILENA SRAVKPGGRL
VYSTCSIDAE EDGLLIRDFL QNHPEWTLKE EKLILPHEEK SDGAYAALLI CA
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