| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0554 |
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| Symbol | |
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| ID | 6275335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 653806 |
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| End bp | 654450 |
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| Gene Length | 645 bp |
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| Protein Length | 214 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612604 |
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| Product | Ribonuclease H |
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| Protein accession | YP_001877173 |
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| Protein GI | 187735061 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0164] Ribonuclease HII |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.14554 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGAAA AACCGCATCC GGATATGAGT TTTGAGATGG AGGCCCGGGC CTCCGGTTTT
CTTTGCGTGG CTGGAGTGGA TGAGGCCGGG CGCGGGCCGT TGGCCGGTCC CGTGGTAGCC
GGCGCCGTTA TTTTGCCTGT TCTGGCGGAG GAGTTAACCG GTTTGAACGA TTCCAAGCAG
TTGACCGCAG CAAAAAGGGA ACGCCTGTTT CTGGCTCTTT TGGAGTGTGA ACAGGCGGTG
TGTTCCGTAG GAGTGGCTTC CGTGGAAGAA ATAGACCGGT TCAACATTTT GAGGGCCACT
CATCTGGCGA TGGCGCGTGC GGTGGAAGGT CTGGCCCTGC GTGCAGATTT CTGCCTGGTG
GATGGATTGC CTGTCAAGGG GCTTCCTGTG CCGCACCGCG CCATTGTAAA GGGGGACGGC
AGGAGCCTTT CCATAGCCGC CGCCAGCGTT CTAGCCAAGG TGACGAGGGA CCGCATGATG
ATGGAAGCGG ACGCTTCCTA CCCGCAGTAT GGTTTTGCAA AACACAAGGG ATATGGCACA
AAAGCCCACA TGGAAGCTCT GCGGCGGCAT GGGCCCTGTC CGCTCCATCG CCGCTCGTTT
GCGCCGGTTT CACAAATGGA ACTGTCCATC CCTGAGCAGG GGTAA
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| Protein sequence | MKEKPHPDMS FEMEARASGF LCVAGVDEAG RGPLAGPVVA GAVILPVLAE ELTGLNDSKQ
LTAAKRERLF LALLECEQAV CSVGVASVEE IDRFNILRAT HLAMARAVEG LALRADFCLV
DGLPVKGLPV PHRAIVKGDG RSLSIAAASV LAKVTRDRMM MEADASYPQY GFAKHKGYGT
KAHMEALRRH GPCPLHRRSF APVSQMELSI PEQG
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