Gene Amuc_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0534 
Symbol 
ID6274998 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp628360 
End bp630762 
Gene Length2403 bp 
Protein Length800 aa 
Translation table11 
GC content61% 
IMG OID642612584 
Productphosphoribosylformylglycinamidine synthase II 
Protein accessionYP_001877153 
Protein GI187735041 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0046] Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain 
TIGRFAM ID[TIGR01736] phosphoribosylformylglycinamidine synthase II 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value0.6525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGCCA AAACCTACCG AACCGTTCCC GTGAGGAACC TGAGCAGCGA CGAACTGCTT 
GAGCTCAGCA AGAAACAGAA GCTTTCCCTG TCCCGTGAAG ACATGGAAGT CGTCCAGCAG
ATTTTCCGGG AAATCGACCG CGACCCCACT GACGTGGAAC TGGAAGTAAT CGCCCAGACG
TGGTCGGAAC ACTGCAAACA CCGCATCTTC TCCGCCTCCA TCAGCCACAG CGTCAACGGC
GGCGCACCGG AGACGGTGAA CAGCCTGTTC AAGACCTACA TCAAGAAGCC TTCCGAAAAG
ATCATGGAAC GCAAACCGGG CTTCGTGCTC AGCGCGTTTG ACGACAATGC CGGCTTCATC
GCCCTGGACG ACAACCTGGC CGTCTGCCTG AAGGCGGAAA CGCACAACCA CCCCTCCGCC
ATTGAACCGT ACGCGGGGGC CAACACCGGG CTGGGCGGCG TTATCCGCGA CATCCTGGGC
GCAGGCAAGG GTGCCAAGCC CATCGCCTCC CTGGATGTCT TCTGCTTCGG CGCTCCGGAC
ACGAATCCGG CAGACATCAC CGCCCCGGAC GTCATCCACC CCCTGGGCAT CATGCGCGGC
GTGGTGCGCG GCGTGCGCGA CTACGGCAAC CGCATGGGCA TTCCCACCGT CAACGGCGCC
ATCCAGTTTG ACCCCACGTA CATTTACAAC CCCCTCGTCT TCTGCGGCAC CGCCGGCGTG
ATTCCGCGCG GCGACATCCT GAAGGAAATG CGTCCCGGCC TCAAGGTCAT CGTCATCGGC
GGGCGCACGG GACGGGACGG CCTCAAGGGA GCCACGTTCT CTTCCGCCGC TCTGGATGAA
GCCTCCCATG AGGAAGACTT CACCGCCGTG CAAATCGGTA ACCCGATTGA AGAGAAGAAA
ACGCTGGACT TCATTCTGGA AGCGCGCGAA CGCGGCCTCA TCGTCTTTAT TACGGACTGC
GGCGCCGGCG GCTTCTCTTC CGCCGCCGGG GAAATGCTCT CCGTCACGGG CGGTGAAATT
TTCCTGGACA ACGCCCCTCT CAAGGAACCG GGCCTCATCT CCTGGGAAAT CTTCCTGTCG
GAATCCCAGG AACGCATGGT TATGGCCGTG GAGGAAAAAG ACCTTCCGGA ACTCCGGAAG
CTGGCAGACA CCTTCCAGAC GGAACTGACC GTCCTAGGCC ATTCCGACGA TACGGGAATC
CTGAAGGTCT GGCACAAGGG GGAACTCGTC TGCTGCCTGG ACAACTCCAA GCTGCATGAC
GCCCCCATCA AGAAGCTGGA ATCCGTATTC ACTCCCGGCA AGGCGCTCAC GGGCCAGCCC
CTCCCGGACA AGGATCTGAA TAAATCCCTG GAAACCGTGA TGGGGGATTT CGCCATCGTT
TCCCGGGAAC CCATCATCCG CGAGTATGAC CACGAGGTGC AGGGCAACAC CATCCTGAAG
CCTCTGGCGG GCGCCCAGGC GGACGCTCCG CAGGACGGCT CCGTGGTGGA TATCGACGGC
TCGGACAAAT GCATGGCCAT GGCTTGCGCC ATTCTTCCGG AATGGGGCAA AACGGATCCC
TACGCCATGG GTACCGGCAC CGTGGATGAA TGTGTGCGCC AGCTCATCCT GGTTGGCTCC
AACCCGGACA AAATCGGCCT GCTGGACAAC TTCTGCATGG GTAATCCGGA AGATCCGGCG
GAACTCGGCC GCCTGGTGGA ATGCGTGAAA GCCATCGCCA AGGCGGCGGA CGCGTACAAT
GCCCCCTTCA TTTCCGGCAA GGACTCCTTC TACAACTATT TTGAAACGGA AGACGGCCCT
ATCAACGTGC CCGTCACCTT CCTCTGCTCC GGCTTTGGTG TGGTGGAAAA CCCGGACCAC
GTCATCGGTT CTTCCCTGAG GCGGAGCAAC AGCCTGCTGT ACCTCATCGG CCATACGGAA
GATGAAATGG GCGGTTCCGT CTTCGCCCGC ACCCACGGGG TGGAAGACGG CAAGGTTCCC
CAGACGGACT GCGCCGCGAA CATGGAACTG TACAAAGCCT ACTACGGCGC CCTGACTTCC
GGTCTGGTGC TCTCCGCCCA TGACGTTTCC GAAGGCGGCC TGGCCGTCAC GGCGGCGGAA
ATGGCCTTTT CCGGCAAGGG AGGCGTTCGG CTGGATCTCA CGAAAGTACC GACCGTCAAC
GGCTGGAAAT CCCCCGCAGT GCCTCTGTTC AGTGAAAGCA CGGGCCGCAT CCTTGTGGAG
GTGGATCCGG AATTCGCCGC GGATTTTGAA ACGGCTATGG ACGGCTTCCC CTGCGCCTGC
ATCGGCGGTG TTACGGAGGA AAAGCGTCTC ACGGCCACCT GCTGCGGCGG AGAAAAGGTG
CTGGATTGCG ACATAGCCAA CCTCAAAAAA CTCTGGAAGG ACGGACTTAC CCCCTATTAT
TGA
 
Protein sequence
MSAKTYRTVP VRNLSSDELL ELSKKQKLSL SREDMEVVQQ IFREIDRDPT DVELEVIAQT 
WSEHCKHRIF SASISHSVNG GAPETVNSLF KTYIKKPSEK IMERKPGFVL SAFDDNAGFI
ALDDNLAVCL KAETHNHPSA IEPYAGANTG LGGVIRDILG AGKGAKPIAS LDVFCFGAPD
TNPADITAPD VIHPLGIMRG VVRGVRDYGN RMGIPTVNGA IQFDPTYIYN PLVFCGTAGV
IPRGDILKEM RPGLKVIVIG GRTGRDGLKG ATFSSAALDE ASHEEDFTAV QIGNPIEEKK
TLDFILEARE RGLIVFITDC GAGGFSSAAG EMLSVTGGEI FLDNAPLKEP GLISWEIFLS
ESQERMVMAV EEKDLPELRK LADTFQTELT VLGHSDDTGI LKVWHKGELV CCLDNSKLHD
APIKKLESVF TPGKALTGQP LPDKDLNKSL ETVMGDFAIV SREPIIREYD HEVQGNTILK
PLAGAQADAP QDGSVVDIDG SDKCMAMACA ILPEWGKTDP YAMGTGTVDE CVRQLILVGS
NPDKIGLLDN FCMGNPEDPA ELGRLVECVK AIAKAADAYN APFISGKDSF YNYFETEDGP
INVPVTFLCS GFGVVENPDH VIGSSLRRSN SLLYLIGHTE DEMGGSVFAR THGVEDGKVP
QTDCAANMEL YKAYYGALTS GLVLSAHDVS EGGLAVTAAE MAFSGKGGVR LDLTKVPTVN
GWKSPAVPLF SESTGRILVE VDPEFAADFE TAMDGFPCAC IGGVTEEKRL TATCCGGEKV
LDCDIANLKK LWKDGLTPYY