Gene Amuc_0406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0406 
Symbol 
ID6274822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp486810 
End bp487847 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content58% 
IMG OID642612456 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 
Protein accessionYP_001877025 
Protein GI187734913 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones80 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTTA CACTTGAAGC CGTGGCCGCC CTCACCGGGG GAAAAATCCT TTCCGGCGAC 
CCCGAACTGA CCGTATTCGG GGTCGCTTCC CTTCTTGACG CATCCCGTGA AGAAGCCTCC
TTCCTTGGCA ATGAAAAATA CTTCCAGGAC TTCCTGCACA CCTCTGCCGG AATCGTGCTG
GTGCCGCCGG GCCTGCCTGC GTATCCAGAA CACGCAGCCT TCGTGGAAGT GGACAACCCC
TCCATGGCAT TCAACGCCCT GGTGAAATAT TTCATGGCTT CCGCCTACCG GTTCACCCCC
GGCATTCATC CCACAGCCAT CATCGACCCC ACGGCCAGCT TCAACCCGGA CAAAATCCAT
GTAGGAGCCT ATACCTGCAT CGGGGCCCAC TGCATAATCG GAGACGGGAC GGACATTGGC
AACGGCTGCG ATATCGGAGA CGGCGTCACC ATGGGGGAAA ACTGCCGCCT GCATGCCCAT
GTTACCATCA GGGAACGCTG CAAACTCGGC AACAGGGTGA CCATCCAGCC CGGAGCCGTC
ATCGGTTCCG ACGGATTCGG CTTCCTGATG GGAGACAATG GACGCTACGT GGGCATTGAC
CAGGTAGGCA TTGTGGAACT GGGGGATGAC GTGGACGTAG GGGCCAACAC CACTATTGAC
CGCGCCAGAT TCGGGCGCAC CATTGTGGGG GAAGGCACCA AAATAGACAA CCTGATCCAG
CTCGGCCATA ACGTCGTTGT CGGCAGGCAT TGCATCATCG TCGCCCAATC CGGCATAGCC
GGCAGCACCA AAGTGGGGGA TTATGCCACC ATCGCCGCCC AGGTCGGCAT CTCAGGACAC
CTCAACATCG GTTCCAAATC CACGCTGGGC GCTAAAACGG GAGTCCTCTC GGACATTCCG
GAAAACTCTA CTTACTGGGG CATGCCGGCT TTCCCCTACA AGGACGCTAC CCGCCAATAC
GCCGCCCTCA AAAAACTTCC AGCACTGATT AAGGAAGTCC GCGCGCTCAA AAAGGAGCTG
GATTCTTCCG GCAAATAA
 
Protein sequence
MKLTLEAVAA LTGGKILSGD PELTVFGVAS LLDASREEAS FLGNEKYFQD FLHTSAGIVL 
VPPGLPAYPE HAAFVEVDNP SMAFNALVKY FMASAYRFTP GIHPTAIIDP TASFNPDKIH
VGAYTCIGAH CIIGDGTDIG NGCDIGDGVT MGENCRLHAH VTIRERCKLG NRVTIQPGAV
IGSDGFGFLM GDNGRYVGID QVGIVELGDD VDVGANTTID RARFGRTIVG EGTKIDNLIQ
LGHNVVVGRH CIIVAQSGIA GSTKVGDYAT IAAQVGISGH LNIGSKSTLG AKTGVLSDIP
ENSTYWGMPA FPYKDATRQY AALKKLPALI KEVRALKKEL DSSGK