Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_0320 |
Symbol | |
ID | 6275046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 377478 |
End bp | 378446 |
Gene Length | 969 bp |
Protein Length | 322 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642612374 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_001876943 |
Protein GI | 187734831 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.173398 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCTCCG TCAGGAACCT CAGCGCCTCC TTCCACACCA GGGCCGGCAT TGTCCGGGCG GTAAGGAACG TGTCCTTTGA TGTAGCCCCG GGGGAAACGC TTGGCATCGT GGGTGAATCC GGATCAGGAA AATCCGTCAC CTGCTACTCC ATGATGGGGC TCATTCCGAT GCCTCCGGGC CGCATTGAAA GCGGTTCCGC CATGCTGAAC GGCACGGATC TGCTCCGTTG CCCGGAAAAG AAACTCCGGG CCATCCGCGG CAAACGCATC TCCATGATCT TCCAGGACCC CATGACCTCC CTCAACCCGT ACCTGACCAT CGGGGAGCAG GTGGCGGAAC CCCTTGTCAT TCACGAAGGG GCCGGCAAAA AGGAAGCGCG GGCACGCGCG CTGGAACAGC TTGCCCTGGC AGGCATACCG GATGCGGAAC AGCGCATGGA CGCATATCCC CACCAATTCT CCGGCGGCAT GCGCCAGCGC GTGATGATTG CCATGGCCCT CATCACCAGG CCGGAAATAC TCATCGCGGA TGAACCCACC ACCGCCCTTG ACGTCACTGT CCAGAAGCAG GTGCTGGATC TCATCAGAAA ACTTCAGCAG GACATGGGCA CCTCCGTCAT CCTCATCACA CATGACCTCG GCGTGGTGCG CCAATACGCG GACCGCATCA ATGTCATGTA TGCAGGCCGC ATCGTGGAAA GCGCCCCGGC GAAGGAACTT CTGGAACATC CCCGGCATGC CTACACCAGA GCCCTGATGA AATCCATTCC CGGGCTGCAT GCGAAAGGCG CCCCCCTCTA TACCATTCCC GGACTGCCTC CCAACATGAC TCAGGAGCCA TGCGGATGCA GCTTCCGCCC CAGGAACACC CTCGGAAACC CGGCACTCTG CCTCACGGAC CGGGAACCGG AGCTGGTGGA AATATCTCCG GGGCACTCAG TCCAGAATTG TCCGGGCTGC CTAGCTTAG
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Protein sequence | MLSVRNLSAS FHTRAGIVRA VRNVSFDVAP GETLGIVGES GSGKSVTCYS MMGLIPMPPG RIESGSAMLN GTDLLRCPEK KLRAIRGKRI SMIFQDPMTS LNPYLTIGEQ VAEPLVIHEG AGKKEARARA LEQLALAGIP DAEQRMDAYP HQFSGGMRQR VMIAMALITR PEILIADEPT TALDVTVQKQ VLDLIRKLQQ DMGTSVILIT HDLGVVRQYA DRINVMYAGR IVESAPAKEL LEHPRHAYTR ALMKSIPGLH AKGAPLYTIP GLPPNMTQEP CGCSFRPRNT LGNPALCLTD REPELVEISP GHSVQNCPGC LA
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