Gene Amuc_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_0298 
Symbol 
ID6275106 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp356853 
End bp357191 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content57% 
IMG OID642612352 
Productribosomal protein L22 
Protein accessionYP_001876921 
Protein GI187734809 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0091] Ribosomal protein L22 
TIGRFAM ID[TIGR01044] ribosomal protein L22, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.495087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTGA AAGCTGTTTA CAAATACGCC CGCATCTCCG CCAAGAAGAT GCGCGATGTT 
GCTCAAGAAA TCCAAGGCTT GTCCGTCTCC CAGGCGACCG ACATCCTGTC CTACACCCCC
AAGAAAGGTG CCTACCTGCT GAATAAGACG CTCAAGTCCG CGTTGGCCAA CGCCGAGAAT
AATGCGGAAC TGTCCGTTGA TACGCTGGTG GTCAAGTCCG TCATGGTCGA TGAAGGGCCC
ACGATGCGCC GCACGATGCC CCGCGCCCGC GGATCCGCCA ACATGATCCG CAAGCGTACA
TCCCATATCA CCGTTATCCT GGCCGATCAA GAAGGCTAG
 
Protein sequence
MEVKAVYKYA RISAKKMRDV AQEIQGLSVS QATDILSYTP KKGAYLLNKT LKSALANAEN 
NAELSVDTLV VKSVMVDEGP TMRRTMPRAR GSANMIRKRT SHITVILADQ EG