| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0233 |
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| Symbol | tdh |
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| ID | 6275290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 291556 |
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| End bp | 292593 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642612281 |
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| Product | L-threonine 3-dehydrogenase |
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| Protein accession | YP_001876857 |
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| Protein GI | 187734745 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
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| TIGRFAM ID | [TIGR00692] L-threonine 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.43371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGGCA TGAAAGCTCT TGTAAAAACG CAGGCTGGCC CCGGTTTGGA ATTGATGGAT
GTTCCTATGC CGGAAGTCGG CCCGAATGAC GTCCTGATCA AAATTCATAA AACAGCCATT
TGCGGCACGG ATCTTCATAT TTGGAATTGG GATAAATGGG CCCAGCAGAC CATTCCGGTA
GGGATGCATG TGGGCCATGA GTTCTGCGGC GTGATTGAGT CCGTAGGTTC TTCCGTGACG
GAATACAAGC CCGGGGAGAT TGTTTCCGGT GAGGGGCATA TTGTCTGCGG CCATTGCCGC
AGCTGCCGTT CAGGGCAGAA GCACTTGTGC CCCAACACAA AGGGTGTGGG AGTCAACAGG
CCCGGCTGCT TTGCGGAGTA CCTTTCCATT CCGCAGGATA ACGTGGTGCG CATCCACAAG
AGCATTCCGA TGGAAATCGC CTCCATTTTT GACCCGCTGG GCAACGCCGT CCATACGGCT
TTGTCCTGGG ATCTGGTGGG CGAGGACGTA CTGATTACGG GAGCCGGGGT TATCGGCTGC
ATGGCTGCCG CCGTCTGCAA GAAGGCCGGA GCCAAGACGG TGGTTATTAC GGACATCAAT
GATTTCCGCC TGGGTCTTGC CAAAACGCTG GGGGCGGACC GAACCGTGAA CGTGACCCGT
GAAAAGCTGG AAGACGTGAT GAAGGAACTG GAAATGACGG AGGGATTTGA CGTGTGCCTG
GAAATGAGCG GCGCTCCGTC CTGCCTGAAG GACATCATCG ACAATTCCCG CAACGGAGCC
AACATTTCCC TGCTGGGGAT TCAGCCCGAT GGTTCCAGCA TCGAGTGGAA TAAGTTCATT
TGGAAAGGGT TGAAGATGAA AGGCATTTAT GGCCGTGAAA TTTTTGAAAC TTGGCATAAA
ATGGATTCCA TGATCCGCAG TGGCTTGAAT GTGGCGCCCA TCATCACGCA CCGTCTGCCC
TACACGGAAT TCCGGGAAGG GTTTGAAGCC ATGAATTCGG GAAAATCCGG CAAGGTTGTT
CTGGACTGGA TTGTTTGA
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| Protein sequence | MGGMKALVKT QAGPGLELMD VPMPEVGPND VLIKIHKTAI CGTDLHIWNW DKWAQQTIPV
GMHVGHEFCG VIESVGSSVT EYKPGEIVSG EGHIVCGHCR SCRSGQKHLC PNTKGVGVNR
PGCFAEYLSI PQDNVVRIHK SIPMEIASIF DPLGNAVHTA LSWDLVGEDV LITGAGVIGC
MAAAVCKKAG AKTVVITDIN DFRLGLAKTL GADRTVNVTR EKLEDVMKEL EMTEGFDVCL
EMSGAPSCLK DIIDNSRNGA NISLLGIQPD GSSIEWNKFI WKGLKMKGIY GREIFETWHK
MDSMIRSGLN VAPIITHRLP YTEFREGFEA MNSGKSGKVV LDWIV
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