| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0193 |
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| Symbol | |
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| ID | 6275350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 242365 |
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| End bp | 243591 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642612239 |
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| Product | cysteine desulfurase, SufS subfamily |
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| Protein accession | YP_001876818 |
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| Protein GI | 187734706 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.70976 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.651856 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGACA CAGCAACCAT TCGCCCGCAG TTCCCCATTC TGGAAACCAG CGTGCACGGC
AAGCCTCTCA TTTACCTGGA TAATGCGGCC ACTACGCAAA AACCCCTGGC CGTGCTGGAC
GCCATCCGTC ACTACTACGA TACGGAGAAC GCCAATGTGC ACCGCGGCTC CCACTACCTG
AGCCAGCTCG CGACGGAAGC GCATGAAGAA TCGCGGGAAA CGGTGGCGCG GTTCATCAAC
GCGCCGGAAA CGGCGGAAGT CCTGTTCACC TCCGGCTGTA CGATGGGCAT CAACCTGGCG
GCGGATACCA TCGCCGGGTC CGGCATGGTC AAACCGGGAG ACGAAGTCAT CGTAACCGCT
TCCGAACACC ATTCCAATAT CGTTCCCTGG CAAATGCTGT GCGAACGCAC GGGCGCCGTC
CTGAAAGCGG TTCCCCTGAC GCCGGGCCAG ACCCTGGACA TGGAAGCTTA CCGGAACATG
CTTTCCCCAC GCACCCGCAT CGTAGCTGTG GGACACGTTT CCAATACGCT GGGAACGGTT
AATCCCGTGA GGGAAATGGC CGCGCTCGCC AAGGAGAACA GGCAGGAAAC CATCGTGCTG
ATTGACGGAG CCCAGGCTGT TTCCCATATG AATGTGGACG TTCAGGAACT GGGCTGCGAC
CTGTATGCCT TTTCCGGCCA CAAGCTGTAC GCACCCACCG GCATCGGCGC GCTGTGGGGA
AAAAGGGAGC TGCTGGAAAA ACTGCCGCCG TGGATGGGCG GCGGGGAAAT GATCAAGGAA
GTCACCTTTG AAAAAACCGT TTACAACGAC ATCCCGTTCA AATATGAAGC GGGAACGCCC
AACATTGGCG GGGCAGTGGG TCTGGCGGCC GCCATCCGCT ACGTCTCCGG GCTGGGTCTG
GACAACATTG CCGCCCATGA ACAGAAACTG ACGGATATGG CGGTGGAAGG CCTGAAGGCC
ATGCCGCGCC TGACCGTACT GGCCCCGGAC GTGCCGCACA GCGCCGTGGT CTCCGTCCTG
GCGGAGGGCG TCCACCACTA TGACCTGGGT ACGCTGCTGG ACCAGATGGG AATTGCCGTA
AGAACCGGGC ACCATTGCTG CCAGCCGCTC ATGTGCGCCC TGGGCACCAC CGGGACTACC
CGCGCCTCCT TTGCCCTGTA CAATACGGAA GAGGAAGTGC AGACCTTCCT CAAATCCATG
AACCGGGCGC TGGACATGCT CTCCTGA
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| Protein sequence | MLDTATIRPQ FPILETSVHG KPLIYLDNAA TTQKPLAVLD AIRHYYDTEN ANVHRGSHYL
SQLATEAHEE SRETVARFIN APETAEVLFT SGCTMGINLA ADTIAGSGMV KPGDEVIVTA
SEHHSNIVPW QMLCERTGAV LKAVPLTPGQ TLDMEAYRNM LSPRTRIVAV GHVSNTLGTV
NPVREMAALA KENRQETIVL IDGAQAVSHM NVDVQELGCD LYAFSGHKLY APTGIGALWG
KRELLEKLPP WMGGGEMIKE VTFEKTVYND IPFKYEAGTP NIGGAVGLAA AIRYVSGLGL
DNIAAHEQKL TDMAVEGLKA MPRLTVLAPD VPHSAVVSVL AEGVHHYDLG TLLDQMGIAV
RTGHHCCQPL MCALGTTGTT RASFALYNTE EEVQTFLKSM NRALDMLS
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