| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0105 |
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| Symbol | |
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| ID | 6274950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 130305 |
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| End bp | 131678 |
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| Gene Length | 1374 bp |
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| Protein Length | 457 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642612150 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001876731 |
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| Protein GI | 187734619 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.265235 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCATCCA CGTTCAAACA TCTCCCCCTT CTGGCCGCCT GTTTCCTTGG CTCCTGCATG
GTAGGCCCTG ATTTCCGGAC GCCGACCAAT GACCTCCCCG CCACGTGGGA GGCGAACAGG
CCCCCCCACA GTTCGGACAA AGATTTGCGT TCCTGGTGGA ATATCTTTGG AGACCCCCAG
CTCAACCGCC TGGTCTCCAC CTCCCTCAAC AACAATCCGG ACATGAAGGT GGCTTTGCTC
CGCATCCGGG AGGCCAGGGA AAAGCTCCGC GTCTCCCAGG CATCCCTGCT TCCCTCCGCA
GACGCCAGCG CCGGGTGGAG CCTGTCCCCG GACAGAGGTT TTCGCAGCTC CACTTCCCAG
AACTTCTCCC TGGGAGCGTC CACCTCCTGG GAGCTGGACC TCTTTGGCGG CAACCGGCGT
TCCATCGAGG CCTCCCGCGC CTCCCTCATG TCCACAGAAG CTTCCGCAGG AGCCGTGCGC
ACAGCCCTGC TGGCGGACGT CGCCACGGCC TACTTTGACT GGATTACCGC CTGCGAACAG
CTCCGCATCG CCAGGGAACA ACTGGAAATC CAACGCAGCA CCCTCACCAT TGCGGAAAAA
CGCTACAAAA CGGAATTCGC CCCCCGTCTG GATGTGGAGC AGGCCACCTC CACCGTCGCC
TCCACGGAAA GCCGCATCCC GCAACTGGAA GCACAGGTGG CCTCCTCTAA AAACCAGCTC
GCCGTGCTGC TGGGAACATA CAATTCCCGT GTAGAACTGA CGCTGCCCAA AGCTTCCGTC
TTTGAGAAAA CGCCCACCGT TCCGGTAGGC CTCCCCTCCG AACTCCTGCG GCGCAGGCCC
GACGTTATCG CCGCTGAGGC GGACCTGCAC GCGGCCGTGG CCAACGTGGG CGTAGCCGTA
GCGGATCTGT ACCCGCGCTT CAGCCTGACG GGCTCCCTTT CCAGCCGCGG CGGAGATTTC
GGCCAGCTCT TCAGGGAAAA CAACAACGCT TGGTCCCTGG GAGGGAATCT GCTCCAGCCC
CTGTTCCGGG GCGGAGCCCT GAGAGCCACG GTACGCGCCC AGAAAGCCGC AGCAGAACAA
GCTGCGGAAA CTTACCGCAA AACGCTCATT ACCGCCGTCT CCGAGGTGGA GGACGCCCTG
ATCGCCTATG GCAGCTATAC CTCCCAGATG CAATACCTGC ACAAGGAAAA CAACGCCAAC
AGAGAAGCGT TCCAGCTCTC CCGCACCCTG TACATCAACG GCGAGACGGA CTTCCTGAAC
GTGATCACCG CCCAGCGTTC CTGGCTCAGC TCGGAGGAAT CCCTGGTCAC CATGAAGCAG
AACATCCGCA AGGCCGTGGT GCAGCTCGCG CGCGCCCTGG GCGGAGGGTG GTAA
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| Protein sequence | MSSTFKHLPL LAACFLGSCM VGPDFRTPTN DLPATWEANR PPHSSDKDLR SWWNIFGDPQ
LNRLVSTSLN NNPDMKVALL RIREAREKLR VSQASLLPSA DASAGWSLSP DRGFRSSTSQ
NFSLGASTSW ELDLFGGNRR SIEASRASLM STEASAGAVR TALLADVATA YFDWITACEQ
LRIAREQLEI QRSTLTIAEK RYKTEFAPRL DVEQATSTVA STESRIPQLE AQVASSKNQL
AVLLGTYNSR VELTLPKASV FEKTPTVPVG LPSELLRRRP DVIAAEADLH AAVANVGVAV
ADLYPRFSLT GSLSSRGGDF GQLFRENNNA WSLGGNLLQP LFRGGALRAT VRAQKAAAEQ
AAETYRKTLI TAVSEVEDAL IAYGSYTSQM QYLHKENNAN REAFQLSRTL YINGETDFLN
VITAQRSWLS SEESLVTMKQ NIRKAVVQLA RALGGGW
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