| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_0102 |
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| Symbol | |
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| ID | 6274959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 126754 |
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| End bp | 128151 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642612147 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001876728 |
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| Protein GI | 187734616 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGGGAT TCATCAAACT CATCATCGTC ATTGCCGTTC TCGGAGGCAT CTGGTTTGCC
TGGGAACAGT GGAAAGGAAA TGAAGCCATC CAGGTGGACT ACCAGACAGA ACCTCTTGAA
AAAGGAAACC TGATGATCAC CATCGAAGCA ACCGGCGTCA CGGAGCCTGA TGAACTGGTA
GATGTAGGCG CCCAGGTCAG CGGAATCATC ATGGAGTTCG GCAAGGACCT GAACGGCAAG
GTGGTGGATT ATTCCAGCCC TGTAAAAGCC GGTCAGATGC TCGCGGAAAT CGACAAGCTT
CCCGTGCAGC TGGACGTTCA GAGGGCGGAA GCCTCCAAAG CGCAGGCCAT TGCCGGAATC
GCCCGCTCCA AGGCGGACAT CCAGCAGGCC AAAGCCAAGC ACCAGCAGGC CAGACTGGAC
CGGGAACGCG CGGAAAAGCT GGGGCCTGGG GATGCCCTGT CCAAATCCAG CTACGACCAG
TATATTGCGG ATGAAGAAAC CGCCCGCGCC AACGTAGCCG TGGCGGAAGC CTCCCTGCAG
GAAGCGGAAG CCTCCCTGAA ACAGGCGGAA GCCGCGCTGA AAAAGGAAAT GCGCAACCTG
GAATACACCA CCATCAAGTC CCCCGTGGAC GGCGTCGTGG TCAAACGCCT GGTCAACATA
GGCCAAACAG TGGTTTCCAG CATGAGCGCC TCCAGCCTGT TTTACATCGC CACAGACCTT
TCCAAGCTGA AAATTTGGGC CGCTGTGAAC GAGGCGGACA TCGGCAGCAT CCGCAAGGGG
CAGGAGGTAC TGTTCACCGT GGACGCTTTC GCCGGCCGCA AATTCAAGGG AACGGTGGAC
AAGATACGGC TGGACGCAAC CATGACGTCC AATGTGGTCA CTTACATCGT GGACATTGAT
GTACCCAATC CGGACAAGCT TCTTATCCCC TATCTGACGG CAAATGTCCA ATTCGTGGTG
GAGGACATAC GAAACGCTTT CCTCGTTTCC AATGCGGCCC TCCGCTTCCG CCCGGAAACA
GAACTGGTCA GTGCTGAACA AAAAGCGGCC TTTGACCGGA TGCAGCCGGA GCTGGCCGCC
CCCGTCCGGG ACGGACAAAA GAAAAAAGCC GTGGTTTGGG AATTGCGGAA CAATCTTCTT
TATCCCCACC TGGTCACCAA AGGGGAAAGC AACGGCATGC TGACGGCCAT TGCGGGAGAA
ACGCTCCGGG AAGGAATGGA AATCGTCTCT ACGGCTCAGA TACTGAACCG CTCCGACAGT
TCGGGGGACG GTTCTTCCGC CTCCGCCGGC GGGGAAAACC CGTTCGCGCC CAAAATGCCC
CCGCGCCGCA AGCCGAGCAC AGGCAACACG AAAACGGCAG CCTCGGCTGG CAATGACGGG
CCGCCCCCGC CTCCCTAA
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| Protein sequence | MKGFIKLIIV IAVLGGIWFA WEQWKGNEAI QVDYQTEPLE KGNLMITIEA TGVTEPDELV
DVGAQVSGII MEFGKDLNGK VVDYSSPVKA GQMLAEIDKL PVQLDVQRAE ASKAQAIAGI
ARSKADIQQA KAKHQQARLD RERAEKLGPG DALSKSSYDQ YIADEETARA NVAVAEASLQ
EAEASLKQAE AALKKEMRNL EYTTIKSPVD GVVVKRLVNI GQTVVSSMSA SSLFYIATDL
SKLKIWAAVN EADIGSIRKG QEVLFTVDAF AGRKFKGTVD KIRLDATMTS NVVTYIVDID
VPNPDKLLIP YLTANVQFVV EDIRNAFLVS NAALRFRPET ELVSAEQKAA FDRMQPELAA
PVRDGQKKKA VVWELRNNLL YPHLVTKGES NGMLTAIAGE TLREGMEIVS TAQILNRSDS
SGDGSSASAG GENPFAPKMP PRRKPSTGNT KTAASAGNDG PPPPP
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